Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.18□□□□□ -2.06
CCL20P78556 AC016712.1-201ENST00000431088 378 ntBASIC2.18□□□□□ -2.06
CCL20P78556 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.18□□□□□ -2.06
CCL20P78556 AC010881.1-201ENST00000433830 235 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AC005019.1-201ENST00000436455 431 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.18□□□□□ -2.06
CCL20P78556 RPS29P12-201ENST00000460178 152 ntBASIC2.18□□□□□ -2.06
CCL20P78556 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCL20P78556 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.18□□□□□ -2.06
CCL20P78556 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.18□□□□□ -2.06
CCL20P78556 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.18□□□□□ -2.06
CCL20P78556 AC083923.1-201ENST00000523708 376 ntBASIC2.18□□□□□ -2.06
CCL20P78556 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.18□□□□□ -2.06
CCL20P78556 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.18□□□□□ -2.06
CCL20P78556 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.18□□□□□ -2.06
CCL20P78556 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.18□□□□□ -2.06
CCL20P78556 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CCL20P78556 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.18□□□□□ -2.06
CCL20P78556 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.18□□□□□ -2.06
CCL20P78556 AC060766.3-201ENST00000591442 263 ntBASIC2.18□□□□□ -2.06
CCL20P78556 TPMTP1-201ENST00000592307 737 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AC091057.2-201ENST00000602594 792 ntBASIC2.18□□□□□ -2.06
CCL20P78556 DUXAP4-201ENST00000603046 613 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AC067959.1-201ENST00000604334 379 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AP001330.4-201ENST00000604350 154 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AL023583.1-201ENST00000607518 1143 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AL513477.2-201ENST00000607858 568 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AC009570.1-201ENST00000609599 745 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AL137847.3-201ENST00000611521 109 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AC004696.1-201ENST00000614345 607 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AL162574.2-201ENST00000614618 657 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AL355810.1-201ENST00000614629 552 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AC090116.1-201ENST00000615679 446 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AL355365.1-201ENST00000616480 294 ntBASIC2.18□□□□□ -2.06
CCL20P78556 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.18□□□□□ -2.06
CCL20P78556 AC006249.1-201ENST00000621223 471 ntBASIC2.18□□□□□ -2.06
CCL20P78556 MIR6730-201ENST00000622213 67 ntBASIC2.18□□□□□ -2.06
CCL20P78556 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CCL20P78556 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCL20P78556 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
CCL20P78556 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCL20P78556 SGO1P2-201ENST00000429458 1589 ntBASIC2.18□□□□□ -2.06
CCL20P78556 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.18□□□□□ -2.06
CCL20P78556 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCL20P78556 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCL20P78556 AC109315.1-201ENST00000584143 1347 ntBASIC2.17□□□□□ -2.06
CCL20P78556 RNU6-799P-201ENST00000363567 107 ntBASIC2.17□□□□□ -2.06
CCL20P78556 RNU6-40P-201ENST00000384254 107 ntBASIC2.17□□□□□ -2.06
CCL20P78556 SNORA54-201ENST00000384281 123 ntBASIC2.17□□□□□ -2.06
CCL20P78556 MIR1289-1-201ENST00000408836 144 ntBASIC2.17□□□□□ -2.06
CCL20P78556 AC008280.1-201ENST00000418851 412 ntBASIC2.17□□□□□ -2.06
CCL20P78556 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.17□□□□□ -2.06
CCL20P78556 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.17□□□□□ -2.06
CCL20P78556 AC129850.1-201ENST00000436203 508 ntBASIC2.17□□□□□ -2.06
CCL20P78556 RAB11AP1-201ENST00000442978 646 ntBASIC2.17□□□□□ -2.06
CCL20P78556 Z75741.1-201ENST00000446793 314 ntBASIC2.17□□□□□ -2.06
CCL20P78556 AL031183.1-201ENST00000457667 207 ntBASIC2.17□□□□□ -2.06
CCL20P78556 AC133134.1-201ENST00000466800 359 ntBASIC2.17□□□□□ -2.06
CCL20P78556 RN7SL293P-201ENST00000481765 281 ntBASIC2.17□□□□□ -2.06
CCL20P78556 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.17□□□□□ -2.06
CCL20P78556 RN7SKP272-201ENST00000516988 232 ntBASIC2.17□□□□□ -2.06
CCL20P78556 SNRPGP16-201ENST00000533275 226 ntBASIC2.17□□□□□ -2.06
CCL20P78556 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.17□□□□□ -2.06
CCL20P78556 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.17□□□□□ -2.06
CCL20P78556 ZNF861P-201ENST00000588126 639 ntBASIC2.17□□□□□ -2.06
CCL20P78556 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.17□□□□□ -2.06
CCL20P78556 CYCSP41-201ENST00000616920 296 ntBASIC2.17□□□□□ -2.06
CCL20P78556 AC092608.3-201ENST00000625017 386 ntBASIC2.17□□□□□ -2.06
CCL20P78556 MIR3651-201ENST00000630427 90 ntBASIC2.17□□□□□ -2.06
CCL20P78556 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.17□□□□□ -2.06
CCL20P78556 AC011460.1-201ENST00000636268 1834 ntBASIC2.17□□□□□ -2.06
CCL20P78556 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.17□□□□□ -2.06
CCL20P78556 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CCL20P78556 ZNF271P-202ENST00000465539 1970 ntBASIC2.16□□□□□ -2.06
CCL20P78556 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.16□□□□□ -2.06
CCL20P78556 VTRNA1-1-201ENST00000363120 99 ntBASIC2.16□□□□□ -2.06
CCL20P78556 RNA5SP50-201ENST00000363731 107 ntBASIC2.16□□□□□ -2.06
CCL20P78556 RNU1-64P-201ENST00000365443 163 ntBASIC2.16□□□□□ -2.06
CCL20P78556 AC068538.1-201ENST00000376856 336 ntBASIC2.16□□□□□ -2.06
CCL20P78556 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CCL20P78556 RNU6-444P-201ENST00000383988 108 ntBASIC2.16□□□□□ -2.06
CCL20P78556 RNU6-1151P-201ENST00000384684 107 ntBASIC2.16□□□□□ -2.06
CCL20P78556 MIR490-201ENST00000384865 128 ntBASIC2.16□□□□□ -2.06
CCL20P78556 RNA5SP210-201ENST00000391034 120 ntBASIC2.16□□□□□ -2.06
CCL20P78556 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCL20P78556 FABP12P1-201ENST00000401911 322 ntBASIC2.16□□□□□ -2.06
CCL20P78556 RPS20P25-201ENST00000412447 352 ntBASIC2.16□□□□□ -2.06
CCL20P78556 UBE2V1P9-201ENST00000414760 368 ntBASIC2.16□□□□□ -2.06
CCL20P78556 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.16□□□□□ -2.06
CCL20P78556 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.16□□□□□ -2.06
CCL20P78556 AC079780.1-201ENST00000428259 207 ntBASIC2.16□□□□□ -2.06
CCL20P78556 AC109583.1-201ENST00000432156 268 ntBASIC2.16□□□□□ -2.06
CCL20P78556 AL513043.1-201ENST00000439124 535 ntBASIC2.16□□□□□ -2.06
CCL20P78556 MTCYBP34-201ENST00000439552 670 ntBASIC2.16□□□□□ -2.06
CCL20P78556 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.16□□□□□ -2.06
CCL20P78556 CDC27P1-201ENST00000445384 715 ntBASIC2.16□□□□□ -2.06
CCL20P78556 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.16□□□□□ -2.06
CCL20P78556 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.16□□□□□ -2.06
CCL20P78556 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.16□□□□□ -2.06
CCL20P78556 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms