Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.27□□□□□ -1.89
LMO4P61968 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.27□□□□□ -1.89
LMO4P61968 MTND2P33-201ENST00000506452 1031 ntBASIC3.27□□□□□ -1.89
LMO4P61968 RPL37P25-201ENST00000507308 276 ntBASIC3.27□□□□□ -1.89
LMO4P61968 AC093853.1-201ENST00000515689 483 ntBASIC3.27□□□□□ -1.89
LMO4P61968 RNU6-1178P-201ENST00000516674 107 ntBASIC3.27□□□□□ -1.89
LMO4P61968 TRMT10BP1-201ENST00000519377 943 ntBASIC3.27□□□□□ -1.89
LMO4P61968 AP001207.1-201ENST00000524051 481 ntBASIC3.27□□□□□ -1.89
LMO4P61968 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.27□□□□□ -1.89
LMO4P61968 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.27□□□□□ -1.89
LMO4P61968 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.27□□□□□ -1.89
LMO4P61968 OR7K1P-201ENST00000546439 926 ntBASIC3.27□□□□□ -1.89
LMO4P61968 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.27□□□□□ -1.89
LMO4P61968 AC136619.2-201ENST00000563361 631 ntBASIC3.27□□□□□ -1.89
LMO4P61968 AC053481.3-201ENST00000577881 843 ntBASIC3.27□□□□□ -1.89
LMO4P61968 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.27□□□□□ -1.89
LMO4P61968 AC104662.1-201ENST00000604448 511 ntBASIC3.27□□□□□ -1.89
LMO4P61968 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LMO4P61968 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.27□□□□□ -1.89
LMO4P61968 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.27□□□□□ -1.89
LMO4P61968 U6.42-201ENST00000618440 107 ntBASIC3.27□□□□□ -1.89
LMO4P61968 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.27□□□□□ -1.89
LMO4P61968 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.27□□□□□ -1.89
LMO4P61968 AC244258.1-201ENST00000637553 1071 ntBASIC3.27□□□□□ -1.89
LMO4P61968 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LMO4P61968 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
LMO4P61968 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LMO4P61968 Z99496.1-201ENST00000469424 1477 ntBASIC3.27□□□□□ -1.89
LMO4P61968 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LMO4P61968 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.27□□□□□ -1.89
LMO4P61968 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LMO4P61968 AC083843.3-201ENST00000623679 2186 ntBASIC3.27□□□□□ -1.89
LMO4P61968 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.26□□□□□ -1.89
LMO4P61968 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.26□□□□□ -1.89
LMO4P61968 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
LMO4P61968 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LMO4P61968 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LMO4P61968 RNA5SP124-201ENST00000362739 110 ntBASIC3.26□□□□□ -1.89
LMO4P61968 RNU5D-1-201ENST00000363299 116 ntBASIC3.26□□□□□ -1.89
LMO4P61968 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LMO4P61968 MIR1251-201ENST00000408552 70 ntBASIC3.26□□□□□ -1.89
LMO4P61968 RAB9AP3-201ENST00000412737 573 ntBASIC3.26□□□□□ -1.89
LMO4P61968 RPS15AP38-201ENST00000413110 372 ntBASIC3.26□□□□□ -1.89
LMO4P61968 MTCYBP38-201ENST00000417160 1123 ntBASIC3.26□□□□□ -1.89
LMO4P61968 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.26□□□□□ -1.89
LMO4P61968 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.26□□□□□ -1.89
LMO4P61968 AC010975.2-201ENST00000427781 588 ntBASIC3.26□□□□□ -1.89
LMO4P61968 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.26□□□□□ -1.89
LMO4P61968 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.26□□□□□ -1.89
LMO4P61968 AL050321.1-201ENST00000432363 400 ntBASIC3.26□□□□□ -1.89
LMO4P61968 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.26□□□□□ -1.89
LMO4P61968 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.26□□□□□ -1.89
LMO4P61968 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.26□□□□□ -1.89
LMO4P61968 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.26□□□□□ -1.89
LMO4P61968 RAB9AP1-201ENST00000449393 573 ntBASIC3.26□□□□□ -1.89
LMO4P61968 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.26□□□□□ -1.89
LMO4P61968 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.26□□□□□ -1.89
LMO4P61968 PNPLA4P1-201ENST00000458328 305 ntBASIC3.26□□□□□ -1.89
LMO4P61968 RPL21P11-201ENST00000461458 483 ntBASIC3.26□□□□□ -1.89
LMO4P61968 AC034236.1-201ENST00000469891 373 ntBASIC3.26□□□□□ -1.89
LMO4P61968 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.26□□□□□ -1.89
LMO4P61968 AC022795.1-201ENST00000473808 480 ntBASIC3.26□□□□□ -1.89
LMO4P61968 S100A11P1-201ENST00000477525 312 ntBASIC3.26□□□□□ -1.89
LMO4P61968 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.26□□□□□ -1.89
LMO4P61968 MTAPP1-201ENST00000489154 819 ntBASIC3.26□□□□□ -1.89
LMO4P61968 AC006499.5-201ENST00000505037 514 ntBASIC3.26□□□□□ -1.89
LMO4P61968 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.26□□□□□ -1.89
LMO4P61968 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.26□□□□□ -1.89
LMO4P61968 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.26□□□□□ -1.89
LMO4P61968 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.26□□□□□ -1.89
LMO4P61968 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.26□□□□□ -1.89
LMO4P61968 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LMO4P61968 RN7SKP31-201ENST00000516354 278 ntBASIC3.26□□□□□ -1.89
LMO4P61968 RNA5SP143-201ENST00000516936 115 ntBASIC3.26□□□□□ -1.89
LMO4P61968 PAICSP4-201ENST00000517543 1253 ntBASIC3.26□□□□□ -1.89
LMO4P61968 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.26□□□□□ -1.89
LMO4P61968 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.26□□□□□ -1.89
LMO4P61968 CYP4A43P-201ENST00000568156 121 ntBASIC3.26□□□□□ -1.89
LMO4P61968 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.26□□□□□ -1.89
LMO4P61968 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.26□□□□□ -1.89
LMO4P61968 AC091805.2-201ENST00000603848 235 ntBASIC3.26□□□□□ -1.89
LMO4P61968 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LMO4P61968 NDUFA8P1-201ENST00000605525 367 ntBASIC3.26□□□□□ -1.89
LMO4P61968 AL357078.3-201ENST00000607528 618 ntBASIC3.26□□□□□ -1.89
LMO4P61968 AC106028.5-201ENST00000610332 395 ntBASIC3.26□□□□□ -1.89
LMO4P61968 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LMO4P61968 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LMO4P61968 AC026368.1-201ENST00000614934 690 ntBASIC3.26□□□□□ -1.89
LMO4P61968 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.26□□□□□ -1.89
LMO4P61968 AL139089.1-201ENST00000620372 975 ntBASIC3.26□□□□□ -1.89
LMO4P61968 MIR6075-201ENST00000620782 95 ntBASIC3.26□□□□□ -1.89
LMO4P61968 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LMO4P61968 AL356266.1-201ENST00000623311 483 ntBASIC3.26□□□□□ -1.89
LMO4P61968 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LMO4P61968 NMD3P1-201ENST00000439704 1488 ntBASIC3.26□□□□□ -1.89
LMO4P61968 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
LMO4P61968 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LMO4P61968 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LMO4P61968 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LMO4P61968 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms