Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ERVFC1-1P60608 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ERVFC1-1P60608 Z82217.1-201ENST00000625157 8149 ntBASIC3.56□□□□□ -1.84
ERVFC1-1P60608 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.56□□□□□ -1.84
ERVFC1-1P60608 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ERVFC1-1P60608 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
ERVFC1-1P60608 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
ERVFC1-1P60608 HSPA8P1-201ENST00000425843 1833 ntBASIC3.56□□□□□ -1.84
ERVFC1-1P60608 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AL022578.1-201ENST00000439330 1433 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC008033.1-201ENST00000216407 1162 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 MIR423-201ENST00000362201 94 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 Y_RNA.402-201ENST00000383972 102 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 DUTP5-201ENST00000406790 469 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 RNU4-55P-201ENST00000410731 137 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC009237.5-201ENST00000414271 501 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 TPMTP2-201ENST00000414372 726 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC093162.1-201ENST00000419682 124 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AL139413.1-201ENST00000421309 217 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 RAD23BP1-201ENST00000421404 1227 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 NPM1P24-201ENST00000428039 894 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 ELOCP14-201ENST00000428070 331 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 USP12PX-201ENST00000432383 1057 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 ELOCP7-201ENST00000439968 331 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 RPL12P3-201ENST00000440080 396 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 MTND3P10-201ENST00000450967 341 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 HMGB3P22-202ENST00000451823 572 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 RPL31P50-201ENST00000471002 296 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC010301.1-201ENST00000473936 355 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 RN7SL97P-201ENST00000486780 299 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC112204.1-201ENST00000502591 103 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 KCTD9P5-201ENST00000504141 1170 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 HMGB1P29-201ENST00000505659 499 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC034159.1-201ENST00000513885 583 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 RN7SKP96-201ENST00000516948 297 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 CENPUP2-201ENST00000555897 1186 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 HMGB1P33-201ENST00000563485 527 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC093249.4-201ENST00000564755 259 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC005730.3-201ENST00000583067 366 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 MAGOH2P-202ENST00000584384 429 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC011487.3-201ENST00000593607 453 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC008945.2-201ENST00000606056 604 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC009994.1-201ENST00000606889 253 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC010424.2-201ENST00000607594 443 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AL136295.6-201ENST00000610486 658 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 EIF3FP1-201ENST00000613970 806 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AL353662.3-201ENST00000625131 237 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 PISRT1-201ENST00000626175 531 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 U6.101-201ENST00000637707 76 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 AC105074.1-201ENST00000623380 3095 ntBASIC3.55□□□□□ -1.84
ERVFC1-1P60608 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ERVFC1-1P60608 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 AC107081.3-201ENST00000612715 2034 ntBASIC3.54□□□□□ -1.84
ERVFC1-1P60608 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ERVFC1-1P60608 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms