Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.17□□□□□ -1.74
HDAC4P56524 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.17□□□□□ -1.74
HDAC4P56524 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.17□□□□□ -1.74
HDAC4P56524 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.17□□□□□ -1.74
HDAC4P56524 AP000811.1-201ENST00000603803 651 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 AC112230.1-201ENST00000604342 547 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 AL049634.3-201ENST00000604968 457 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 AL034351.1-201ENST00000605288 668 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HDAC4P56524 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HDAC4P56524 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HDAC4P56524 AC087359.1-201ENST00000508335 1740 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HDAC4P56524 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 TNPO1P3-201ENST00000436471 2662 ntBASIC4.17□□□□□ -1.74
HDAC4P56524 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HDAC4P56524 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.16□□□□□ -1.74
HDAC4P56524 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HDAC4P56524 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HDAC4P56524 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
HDAC4P56524 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HDAC4P56524 RNU6-374P-201ENST00000364146 108 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 SNORA51.6-201ENST00000384151 125 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 CYCSP45-201ENST00000402289 315 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 AL024474.1-201ENST00000404655 591 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.16□□□□□ -1.74
HDAC4P56524 RN7SKP56-201ENST00000410513 331 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 USP9YP33-201ENST00000412220 421 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 HSFY4P-201ENST00000415994 1181 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.16□□□□□ -1.74
HDAC4P56524 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HDAC4P56524 USP9YP35-201ENST00000435696 412 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.16□□□□□ -1.74
HDAC4P56524 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.16□□□□□ -1.74
HDAC4P56524 RPL39P6-201ENST00000448289 150 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.16□□□□□ -1.74
HDAC4P56524 OR6C5P-201ENST00000452388 923 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 CEACAMP4-201ENST00000457676 421 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.16□□□□□ -1.74
HDAC4P56524 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.16□□□□□ -1.74
HDAC4P56524 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.16□□□□□ -1.74
HDAC4P56524 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.16□□□□□ -1.74
HDAC4P56524 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.16□□□□□ -1.74
HDAC4P56524 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.16□□□□□ -1.74
HDAC4P56524 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.16□□□□□ -1.74
HDAC4P56524 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.16□□□□□ -1.74
HDAC4P56524 AC004987.4-201ENST00000603383 338 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 AL163642.2-201ENST00000604722 1019 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 RNU4-89P-201ENST00000607443 133 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 AL513477.2-201ENST00000607858 568 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 AC024560.3-201ENST00000608482 349 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 AC243773.3-201ENST00000613270 256 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 LINC00561-201ENST00000565815 2738 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 MAPK10-373ENST00000641983 6772 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HDAC4P56524 USP8P1-201ENST00000494673 3183 ntBASIC4.16□□□□□ -1.74
HDAC4P56524 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.16□□□□□ -1.74
HDAC4P56524 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HDAC4P56524 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HDAC4P56524 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HDAC4P56524 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HDAC4P56524 AC130650.2-201ENST00000618736 2403 ntBASIC4.15□□□□□ -1.74
HDAC4P56524 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.15□□□□□ -1.74
HDAC4P56524 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.15□□□□□ -1.74
HDAC4P56524 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HDAC4P56524 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.15□□□□□ -1.74
HDAC4P56524 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HDAC4P56524 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HDAC4P56524 RNU1-13P-201ENST00000384499 162 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 RNU6-253P-201ENST00000384730 105 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 RPL21P65-201ENST00000406094 466 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 MIR1251-201ENST00000408552 70 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 AC019178.2-201ENST00000423595 505 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 OR4C10P-201ENST00000434991 931 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.15□□□□□ -1.75
HDAC4P56524 MTND4P6-201ENST00000438297 472 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 AC083863.1-201ENST00000438811 231 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.15□□□□□ -1.75
HDAC4P56524 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.15□□□□□ -1.75
HDAC4P56524 RPS20P32-201ENST00000456044 356 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 AL136097.1-201ENST00000456945 913 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 RPS15AP17-201ENST00000470598 390 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 SETP11-201ENST00000473027 690 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 SYPL1P1-201ENST00000473622 768 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 RPL30P6-201ENST00000475925 342 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.15□□□□□ -1.75
HDAC4P56524 AC104685.1-201ENST00000502445 371 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 AC108078.3-201ENST00000502633 489 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.15□□□□□ -1.75
HDAC4P56524 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.15□□□□□ -1.75
HDAC4P56524 XKRY-201ENST00000510392 1100 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.15□□□□□ -1.75
HDAC4P56524 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.15□□□□□ -1.75
HDAC4P56524 MTCO3P28-201ENST00000513351 515 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.15□□□□□ -1.75
HDAC4P56524 YPEL5P3-201ENST00000547227 352 ntBASIC4.15□□□□□ -1.75
HDAC4P56524 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.15□□□□□ -1.75
HDAC4P56524 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HDAC4P56524 GNRHR2P1-201ENST00000555315 631 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms