Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PAX9P55771 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.28□□□□□ -1.88
PAX9P55771 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PAX9P55771 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PAX9P55771 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PAX9P55771 AL121657.1-201ENST00000327215 531 ntBASIC3.28□□□□□ -1.88
PAX9P55771 RNU1-14P-201ENST00000362759 152 ntBASIC3.28□□□□□ -1.88
PAX9P55771 U3.4-201ENST00000363352 213 ntBASIC3.28□□□□□ -1.88
PAX9P55771 RNU6-263P-201ENST00000363811 107 ntBASIC3.28□□□□□ -1.88
PAX9P55771 RNU6-501P-201ENST00000364072 100 ntBASIC3.28□□□□□ -1.88
PAX9P55771 RNU6-878P-201ENST00000384578 110 ntBASIC3.28□□□□□ -1.88
PAX9P55771 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PAX9P55771 AL138878.1-201ENST00000405131 347 ntBASIC3.28□□□□□ -1.88
PAX9P55771 MIR320C1-201ENST00000408566 88 ntBASIC3.28□□□□□ -1.88
PAX9P55771 RNA5SP56-201ENST00000410277 118 ntBASIC3.28□□□□□ -1.88
PAX9P55771 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.28□□□□□ -1.88
PAX9P55771 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.28□□□□□ -1.88
PAX9P55771 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.28□□□□□ -1.88
PAX9P55771 AC119751.6-201ENST00000416712 186 ntBASIC3.28□□□□□ -1.88
PAX9P55771 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.28□□□□□ -1.88
PAX9P55771 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PAX9P55771 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.28□□□□□ -1.88
PAX9P55771 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.28□□□□□ -1.88
PAX9P55771 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.28□□□□□ -1.88
PAX9P55771 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.28□□□□□ -1.88
PAX9P55771 TPT1P13-201ENST00000449760 499 ntBASIC3.28□□□□□ -1.88
PAX9P55771 SUMO2P2-201ENST00000456482 255 ntBASIC3.28□□□□□ -1.88
PAX9P55771 BTF3P5-201ENST00000457252 467 ntBASIC3.28□□□□□ -1.88
PAX9P55771 HMGB3P30-201ENST00000457863 606 ntBASIC3.28□□□□□ -1.88
PAX9P55771 AP001992.1-205ENST00000462248 379 ntBASIC3.28□□□□□ -1.88
PAX9P55771 AC017015.1-201ENST00000477387 286 ntBASIC3.28□□□□□ -1.88
PAX9P55771 AC068724.1-201ENST00000487100 792 ntBASIC3.28□□□□□ -1.88
PAX9P55771 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.28□□□□□ -1.88
PAX9P55771 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.28□□□□□ -1.88
PAX9P55771 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.28□□□□□ -1.88
PAX9P55771 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.28□□□□□ -1.88
PAX9P55771 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.28□□□□□ -1.88
PAX9P55771 RPL12P22-201ENST00000519073 490 ntBASIC3.28□□□□□ -1.88
PAX9P55771 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.28□□□□□ -1.88
PAX9P55771 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.28□□□□□ -1.88
PAX9P55771 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.28□□□□□ -1.88
PAX9P55771 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.28□□□□□ -1.88
PAX9P55771 OR5AP1P-201ENST00000529730 940 ntBASIC3.28□□□□□ -1.88
PAX9P55771 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.28□□□□□ -1.88
PAX9P55771 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.28□□□□□ -1.88
PAX9P55771 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.28□□□□□ -1.88
PAX9P55771 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.28□□□□□ -1.88
PAX9P55771 AC023161.2-201ENST00000551218 780 ntBASIC3.28□□□□□ -1.88
PAX9P55771 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.28□□□□□ -1.88
PAX9P55771 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PAX9P55771 CENPUP2-201ENST00000555897 1186 ntBASIC3.28□□□□□ -1.88
PAX9P55771 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.28□□□□□ -1.88
PAX9P55771 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
PAX9P55771 MIR544B-201ENST00000582372 78 ntBASIC3.28□□□□□ -1.88
PAX9P55771 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.28□□□□□ -1.88
PAX9P55771 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.28□□□□□ -1.88
PAX9P55771 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PAX9P55771 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.28□□□□□ -1.88
PAX9P55771 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.28□□□□□ -1.88
PAX9P55771 AC007687.1-201ENST00000602704 304 ntBASIC3.28□□□□□ -1.88
PAX9P55771 LLPHP1-201ENST00000603571 367 ntBASIC3.28□□□□□ -1.88
PAX9P55771 AC020910.2-201ENST00000603635 610 ntBASIC3.28□□□□□ -1.88
PAX9P55771 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.28□□□□□ -1.88
PAX9P55771 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.28□□□□□ -1.88
PAX9P55771 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.28□□□□□ -1.88
PAX9P55771 AC140479.6-201ENST00000633535 357 ntBASIC3.28□□□□□ -1.88
PAX9P55771 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PAX9P55771 MTCO1P24-201ENST00000515438 1558 ntBASIC3.28□□□□□ -1.88
PAX9P55771 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PAX9P55771 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PAX9P55771 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PAX9P55771 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.89
PAX9P55771 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
PAX9P55771 AL356473.1-201ENST00000406203 1408 ntBASIC3.27□□□□□ -1.89
PAX9P55771 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
PAX9P55771 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.27□□□□□ -1.89
PAX9P55771 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PAX9P55771 AC097714.1-201ENST00000511272 1647 ntBASIC3.27□□□□□ -1.89
PAX9P55771 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PAX9P55771 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PAX9P55771 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PAX9P55771 RNU6-761P-201ENST00000384148 107 ntBASIC3.27□□□□□ -1.89
PAX9P55771 MIR129-1-201ENST00000384972 72 ntBASIC3.27□□□□□ -1.89
PAX9P55771 MT-TC-201ENST00000387405 66 ntBASIC3.27□□□□□ -1.89
PAX9P55771 AL355379.1-201ENST00000405542 640 ntBASIC3.27□□□□□ -1.89
PAX9P55771 RPS16P5-201ENST00000406501 404 ntBASIC3.27□□□□□ -1.89
PAX9P55771 RN7SKP266-201ENST00000410232 287 ntBASIC3.27□□□□□ -1.89
PAX9P55771 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.27□□□□□ -1.89
PAX9P55771 RPL36AP36-201ENST00000418616 301 ntBASIC3.27□□□□□ -1.89
PAX9P55771 MORF4L1P6-201ENST00000418771 268 ntBASIC3.27□□□□□ -1.89
PAX9P55771 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.27□□□□□ -1.89
PAX9P55771 AL159169.1-201ENST00000421119 127 ntBASIC3.27□□□□□ -1.89
PAX9P55771 MTCO2P5-201ENST00000422621 426 ntBASIC3.27□□□□□ -1.89
PAX9P55771 FAR2P4-202ENST00000425399 584 ntBASIC3.27□□□□□ -1.89
PAX9P55771 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.27□□□□□ -1.89
PAX9P55771 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.27□□□□□ -1.89
PAX9P55771 AL358472.1-201ENST00000431295 329 ntBASIC3.27□□□□□ -1.89
PAX9P55771 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.27□□□□□ -1.89
PAX9P55771 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.27□□□□□ -1.89
PAX9P55771 AL831737.1-201ENST00000441288 271 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms