Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RPS3AP12-201ENST00000443616 753 ntBASIC3.28□□□□□ -1.88
CDH4P55283 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH4P55283 AC004022.1-201ENST00000447766 1066 ntBASIC3.28□□□□□ -1.88
CDH4P55283 AL034418.1-201ENST00000448675 860 ntBASIC3.28□□□□□ -1.88
CDH4P55283 NDUFA5P7-201ENST00000452914 242 ntBASIC3.28□□□□□ -1.88
CDH4P55283 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH4P55283 RN7SL863P-201ENST00000462370 296 ntBASIC3.28□□□□□ -1.88
CDH4P55283 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH4P55283 RN7SL504P-201ENST00000494496 287 ntBASIC3.28□□□□□ -1.88
CDH4P55283 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH4P55283 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH4P55283 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH4P55283 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH4P55283 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.28□□□□□ -1.88
CDH4P55283 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH4P55283 AC087272.1-201ENST00000523624 533 ntBASIC3.28□□□□□ -1.88
CDH4P55283 AC004024.1-201ENST00000549244 247 ntBASIC3.28□□□□□ -1.88
CDH4P55283 AC010198.2-201ENST00000550612 259 ntBASIC3.28□□□□□ -1.88
CDH4P55283 AL121603.1-201ENST00000553815 142 ntBASIC3.28□□□□□ -1.88
CDH4P55283 OR4H12P-201ENST00000556269 907 ntBASIC3.28□□□□□ -1.88
CDH4P55283 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH4P55283 SNORD39.3-201ENST00000584451 71 ntBASIC3.28□□□□□ -1.88
CDH4P55283 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH4P55283 AC098483.2-201ENST00000603158 454 ntBASIC3.28□□□□□ -1.88
CDH4P55283 AC128687.1-201ENST00000605304 619 ntBASIC3.28□□□□□ -1.88
CDH4P55283 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH4P55283 uc_338.25-201ENST00000613756 156 ntBASIC3.28□□□□□ -1.88
CDH4P55283 AC073968.1-201ENST00000618594 637 ntBASIC3.28□□□□□ -1.88
CDH4P55283 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.28□□□□□ -1.88
CDH4P55283 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH4P55283 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH4P55283 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH4P55283 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH4P55283 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CDH4P55283 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDH4P55283 OR1S2-201ENST00000302592 978 ntBASIC3.27□□□□□ -1.89
CDH4P55283 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH4P55283 MTND4LP20-201ENST00000402379 270 ntBASIC3.27□□□□□ -1.89
CDH4P55283 AL121978.1-201ENST00000402778 359 ntBASIC3.27□□□□□ -1.89
CDH4P55283 AL023807.1-201ENST00000407932 359 ntBASIC3.27□□□□□ -1.89
CDH4P55283 SNORA11.1-201ENST00000408133 129 ntBASIC3.27□□□□□ -1.89
CDH4P55283 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH4P55283 RPS6P14-201ENST00000425165 719 ntBASIC3.27□□□□□ -1.89
CDH4P55283 TRIAP1P1-201ENST00000427062 225 ntBASIC3.27□□□□□ -1.89
CDH4P55283 AC006548.1-201ENST00000427470 102 ntBASIC3.27□□□□□ -1.89
CDH4P55283 ISCA1P2-201ENST00000438679 421 ntBASIC3.27□□□□□ -1.89
CDH4P55283 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH4P55283 AC115115.1-201ENST00000449927 248 ntBASIC3.27□□□□□ -1.89
CDH4P55283 snoU13.4-201ENST00000458916 104 ntBASIC3.27□□□□□ -1.89
CDH4P55283 RNU7-140P-201ENST00000459546 60 ntBASIC3.27□□□□□ -1.89
CDH4P55283 AC008379.1-201ENST00000463655 464 ntBASIC3.27□□□□□ -1.89
CDH4P55283 RPS27AP1-201ENST00000475545 471 ntBASIC3.27□□□□□ -1.89
CDH4P55283 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH4P55283 AC027338.1-201ENST00000514840 825 ntBASIC3.27□□□□□ -1.89
CDH4P55283 SNORA70.24-201ENST00000517233 118 ntBASIC3.27□□□□□ -1.89
CDH4P55283 RN7SKP57-201ENST00000517248 293 ntBASIC3.27□□□□□ -1.89
CDH4P55283 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH4P55283 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDH4P55283 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CDH4P55283 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.27□□□□□ -1.89
CDH4P55283 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDH4P55283 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH4P55283 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH4P55283 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH4P55283 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH4P55283 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH4P55283 AC018692.3-201ENST00000623929 123 ntBASIC3.27□□□□□ -1.89
CDH4P55283 CR381572.1-201ENST00000625098 102 ntBASIC3.27□□□□□ -1.89
CDH4P55283 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CDH4P55283 MTND2P41-201ENST00000637599 773 ntBASIC3.27□□□□□ -1.89
CDH4P55283 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH4P55283 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CDH4P55283 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH4P55283 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH4P55283 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH4P55283 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CDH4P55283 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH4P55283 AC111188.2-201ENST00000529697 1387 ntBASIC3.26□□□□□ -1.89
CDH4P55283 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH4P55283 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH4P55283 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH4P55283 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CDH4P55283 RNU6-609P-201ENST00000365459 107 ntBASIC3.26□□□□□ -1.89
CDH4P55283 OR1L1-202ENST00000373686 1083 ntBASIC3.26□□□□□ -1.89
CDH4P55283 TAF13P2-201ENST00000416876 286 ntBASIC3.26□□□□□ -1.89
CDH4P55283 AL512649.1-201ENST00000428997 581 ntBASIC3.26□□□□□ -1.89
CDH4P55283 AC127537.2-201ENST00000439258 465 ntBASIC3.26□□□□□ -1.89
CDH4P55283 OR51B8P-201ENST00000449892 769 ntBASIC3.26□□□□□ -1.89
CDH4P55283 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.26□□□□□ -1.89
CDH4P55283 RPL32P14-201ENST00000463196 378 ntBASIC3.26□□□□□ -1.89
CDH4P55283 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH4P55283 RPS3AP43-201ENST00000479743 781 ntBASIC3.26□□□□□ -1.89
CDH4P55283 AC012181.1-201ENST00000479895 423 ntBASIC3.26□□□□□ -1.89
CDH4P55283 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH4P55283 MTND4LP22-201ENST00000508209 276 ntBASIC3.26□□□□□ -1.89
CDH4P55283 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH4P55283 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH4P55283 AL163153.1-201ENST00000554223 283 ntBASIC3.26□□□□□ -1.89
CDH4P55283 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH4P55283 AC124283.4-201ENST00000581815 456 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms