Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AP001269.3-201ENST00000588718 329 ntBASIC3.85□□□□□ -1.79
LBX1P52954 AC022022.2-201ENST00000602989 360 ntBASIC3.85□□□□□ -1.79
LBX1P52954 AC069304.3-201ENST00000603938 1084 ntBASIC3.85□□□□□ -1.79
LBX1P52954 AC093424.1-201ENST00000604999 338 ntBASIC3.85□□□□□ -1.79
LBX1P52954 AC079395.3-201ENST00000615161 484 ntBASIC3.85□□□□□ -1.79
LBX1P52954 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.85□□□□□ -1.79
LBX1P52954 RNU6-156P-201ENST00000621869 107 ntBASIC3.85□□□□□ -1.79
LBX1P52954 AP006248.2-201ENST00000623309 592 ntBASIC3.85□□□□□ -1.79
LBX1P52954 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.85□□□□□ -1.79
LBX1P52954 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.85□□□□□ -1.79
LBX1P52954 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LBX1P52954 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.85□□□□□ -1.79
LBX1P52954 OR5BR1P-201ENST00000524992 1330 ntBASIC3.85□□□□□ -1.79
LBX1P52954 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
LBX1P52954 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
LBX1P52954 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
LBX1P52954 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
LBX1P52954 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.85□□□□□ -1.79
LBX1P52954 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.84□□□□□ -1.79
LBX1P52954 AL353746.1-201ENST00000566293 6881 ntBASIC3.84□□□□□ -1.79
LBX1P52954 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LBX1P52954 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
LBX1P52954 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.84□□□□□ -1.79
LBX1P52954 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LBX1P52954 SNORD116-23-201ENST00000384645 92 ntBASIC3.84□□□□□ -1.79
LBX1P52954 MTND4P13-201ENST00000402078 1023 ntBASIC3.84□□□□□ -1.79
LBX1P52954 RNU2-21P-201ENST00000410368 188 ntBASIC3.84□□□□□ -1.79
LBX1P52954 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.84□□□□□ -1.79
LBX1P52954 AC004022.2-201ENST00000413824 193 ntBASIC3.84□□□□□ -1.79
LBX1P52954 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.84□□□□□ -1.79
LBX1P52954 MTCO2P21-201ENST00000419780 677 ntBASIC3.84□□□□□ -1.79
LBX1P52954 NUP35P1-201ENST00000422734 947 ntBASIC3.84□□□□□ -1.79
LBX1P52954 RWDD4P2-201ENST00000426392 563 ntBASIC3.84□□□□□ -1.79
LBX1P52954 SKP1P3-201ENST00000429280 487 ntBASIC3.84□□□□□ -1.79
LBX1P52954 MTCO1P3-201ENST00000429327 192 ntBASIC3.84□□□□□ -1.79
LBX1P52954 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.84□□□□□ -1.79
LBX1P52954 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.84□□□□□ -1.79
LBX1P52954 RPL7P47-201ENST00000497299 556 ntBASIC3.84□□□□□ -1.79
LBX1P52954 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.84□□□□□ -1.79
LBX1P52954 MTCYBP16-201ENST00000509187 1129 ntBASIC3.84□□□□□ -1.79
LBX1P52954 AC048346.1-201ENST00000510247 144 ntBASIC3.84□□□□□ -1.79
LBX1P52954 APOOP4-201ENST00000513530 597 ntBASIC3.84□□□□□ -1.79
LBX1P52954 RNA5SP367-201ENST00000516557 118 ntBASIC3.84□□□□□ -1.79
LBX1P52954 AC008694.2-201ENST00000517591 306 ntBASIC3.84□□□□□ -1.79
LBX1P52954 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.84□□□□□ -1.79
LBX1P52954 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.84□□□□□ -1.79
LBX1P52954 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.84□□□□□ -1.79
LBX1P52954 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.84□□□□□ -1.79
LBX1P52954 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.84□□□□□ -1.79
LBX1P52954 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.84□□□□□ -1.79
LBX1P52954 VN1R90P-201ENST00000595717 726 ntBASIC3.84□□□□□ -1.79
LBX1P52954 AC098826.3-201ENST00000603823 466 ntBASIC3.84□□□□□ -1.79
LBX1P52954 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.84□□□□□ -1.79
LBX1P52954 AC107075.1-201ENST00000613695 314 ntBASIC3.84□□□□□ -1.79
LBX1P52954 AC140725.3-201ENST00000616193 880 ntBASIC3.84□□□□□ -1.79
LBX1P52954 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.84□□□□□ -1.79
LBX1P52954 AC109809.1-201ENST00000619665 545 ntBASIC3.84□□□□□ -1.79
LBX1P52954 AP000770.2-201ENST00000623694 100 ntBASIC3.84□□□□□ -1.79
LBX1P52954 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.84□□□□□ -1.79
LBX1P52954 AC006927.4-201ENST00000639187 543 ntBASIC3.84□□□□□ -1.79
LBX1P52954 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LBX1P52954 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
LBX1P52954 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.8
LBX1P52954 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
LBX1P52954 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LBX1P52954 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.83□□□□□ -1.8
LBX1P52954 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LBX1P52954 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LBX1P52954 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
LBX1P52954 HMGB1P5-201ENST00000255320 642 ntBASIC3.83□□□□□ -1.8
LBX1P52954 SNORD116.1-201ENST00000365628 92 ntBASIC3.83□□□□□ -1.8
LBX1P52954 RNU6-636P-201ENST00000384598 107 ntBASIC3.83□□□□□ -1.8
LBX1P52954 MIR708-201ENST00000390708 88 ntBASIC3.83□□□□□ -1.8
LBX1P52954 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.83□□□□□ -1.8
LBX1P52954 RNU6-272P-201ENST00000411028 104 ntBASIC3.83□□□□□ -1.8
LBX1P52954 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.83□□□□□ -1.8
LBX1P52954 EEF1A1P41-201ENST00000414667 207 ntBASIC3.83□□□□□ -1.8
LBX1P52954 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.83□□□□□ -1.8
LBX1P52954 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.83□□□□□ -1.8
LBX1P52954 HMGB1P16-201ENST00000447155 540 ntBASIC3.83□□□□□ -1.8
LBX1P52954 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
LBX1P52954 AC099563.1-201ENST00000456086 418 ntBASIC3.83□□□□□ -1.8
LBX1P52954 AC005410.1-202ENST00000460347 485 ntBASIC3.83□□□□□ -1.8
LBX1P52954 AC011979.1-201ENST00000472300 483 ntBASIC3.83□□□□□ -1.8
LBX1P52954 AP000893.1-201ENST00000474462 794 ntBASIC3.83□□□□□ -1.8
LBX1P52954 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LBX1P52954 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LBX1P52954 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LBX1P52954 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LBX1P52954 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.83□□□□□ -1.8
LBX1P52954 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LBX1P52954 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.83□□□□□ -1.8
LBX1P52954 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.83□□□□□ -1.8
LBX1P52954 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.83□□□□□ -1.8
LBX1P52954 HIGD1AP1-201ENST00000550979 275 ntBASIC3.83□□□□□ -1.8
LBX1P52954 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LBX1P52954 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.83□□□□□ -1.8
LBX1P52954 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.83□□□□□ -1.8
LBX1P52954 AC090695.1-201ENST00000561269 1222 ntBASIC3.83□□□□□ -1.8
LBX1P52954 MIR2682-201ENST00000580305 110 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms