Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.59□□□□□ -1.99
GTF2A1P52655 RPS4XP10-201ENST00000465034 731 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 AC133134.1-201ENST00000466800 359 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 RN7SL542P-201ENST00000467147 294 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 AC010301.1-201ENST00000473936 355 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 MTND3P6-201ENST00000485242 339 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.59□□□□□ -1.99
GTF2A1P52655 AC117522.3-201ENST00000507974 584 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 HIGD1AP3-201ENST00000515857 278 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 AC104115.2-201ENST00000523026 687 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.59□□□□□ -1.99
GTF2A1P52655 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.59□□□□□ -1.99
GTF2A1P52655 HPRT1P3-201ENST00000539521 576 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
GTF2A1P52655 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.59□□□□□ -1.99
GTF2A1P52655 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.59□□□□□ -1.99
GTF2A1P52655 AMZ2P1-203ENST00000565833 850 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.59□□□□□ -1.99
GTF2A1P52655 RPS15AP11-201ENST00000594193 385 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 AL136295.6-201ENST00000610486 658 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 AL356863.1-201ENST00000623378 1080 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 AC016717.3-201ENST00000624730 554 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 CKAP2P1-201ENST00000555477 2049 ntBASIC2.59□□□□□ -2
GTF2A1P52655 AL359715.4-201ENST00000606629 1436 ntBASIC2.59□□□□□ -2
GTF2A1P52655 AC092593.1-201ENST00000515413 1815 ntBASIC2.58□□□□□ -2
GTF2A1P52655 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
GTF2A1P52655 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
GTF2A1P52655 MIR554-201ENST00000384874 96 ntBASIC2.58□□□□□ -2
GTF2A1P52655 HMGB3P2-201ENST00000411913 584 ntBASIC2.58□□□□□ -2
GTF2A1P52655 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.58□□□□□ -2
GTF2A1P52655 AL606495.1-201ENST00000422100 813 ntBASIC2.58□□□□□ -2
GTF2A1P52655 AL353678.1-201ENST00000422735 741 ntBASIC2.58□□□□□ -2
GTF2A1P52655 DUTP6-201ENST00000425573 462 ntBASIC2.58□□□□□ -2
GTF2A1P52655 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.58□□□□□ -2
GTF2A1P52655 RPL37P4-201ENST00000448908 268 ntBASIC2.58□□□□□ -2
GTF2A1P52655 HMGB1P15-201ENST00000453854 435 ntBASIC2.58□□□□□ -2
GTF2A1P52655 AP002345.1-201ENST00000456493 928 ntBASIC2.58□□□□□ -2
GTF2A1P52655 AC117440.1-201ENST00000474107 571 ntBASIC2.58□□□□□ -2
GTF2A1P52655 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.58□□□□□ -2
GTF2A1P52655 AC108734.3-201ENST00000481241 1165 ntBASIC2.58□□□□□ -2
GTF2A1P52655 RN7SL293P-201ENST00000481765 281 ntBASIC2.58□□□□□ -2
GTF2A1P52655 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.58□□□□□ -2
GTF2A1P52655 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.58□□□□□ -2
GTF2A1P52655 MIR7973-1-201ENST00000614683 76 ntBASIC2.58□□□□□ -2
GTF2A1P52655 MIR6864-201ENST00000617935 70 ntBASIC2.58□□□□□ -2
GTF2A1P52655 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.58□□□□□ -2
GTF2A1P52655 FAM157B-203ENST00000639350 358 ntBASIC2.58□□□□□ -2
GTF2A1P52655 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.58□□□□□ -2
GTF2A1P52655 AC007342.9-201ENST00000623877 1385 ntBASIC2.58□□□□□ -2
GTF2A1P52655 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.57□□□□□ -2
GTF2A1P52655 TAF9BP1-201ENST00000396646 746 ntBASIC2.57□□□□□ -2
GTF2A1P52655 NUP35P2-201ENST00000416748 943 ntBASIC2.57□□□□□ -2
GTF2A1P52655 AC005300.1-201ENST00000428401 373 ntBASIC2.57□□□□□ -2
GTF2A1P52655 RPL37P1-201ENST00000432310 284 ntBASIC2.57□□□□□ -2
GTF2A1P52655 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.57□□□□□ -2
GTF2A1P52655 DPPA3P1-201ENST00000448050 469 ntBASIC2.57□□□□□ -2
GTF2A1P52655 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.57□□□□□ -2
GTF2A1P52655 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.57□□□□□ -2
GTF2A1P52655 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.57□□□□□ -2
GTF2A1P52655 AC113155.1-201ENST00000511141 769 ntBASIC2.57□□□□□ -2
GTF2A1P52655 RNA5SP471-201ENST00000516971 106 ntBASIC2.57□□□□□ -2
GTF2A1P52655 AC023632.4-201ENST00000517783 191 ntBASIC2.57□□□□□ -2
GTF2A1P52655 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.57□□□□□ -2
GTF2A1P52655 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.57□□□□□ -2
GTF2A1P52655 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.57□□□□□ -2
GTF2A1P52655 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.57□□□□□ -2
GTF2A1P52655 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.57□□□□□ -2
GTF2A1P52655 AC012182.1-201ENST00000570133 895 ntBASIC2.57□□□□□ -2
GTF2A1P52655 AC009127.3-201ENST00000570531 403 ntBASIC2.57□□□□□ -2
GTF2A1P52655 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.57□□□□□ -2
GTF2A1P52655 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.57□□□□□ -2
GTF2A1P52655 AC007566.2-201ENST00000603642 413 ntBASIC2.57□□□□□ -2
GTF2A1P52655 AC106791.2-201ENST00000604680 391 ntBASIC2.57□□□□□ -2
GTF2A1P52655 AC245884.12-201ENST00000615364 59 ntBASIC2.57□□□□□ -2
GTF2A1P52655 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.57□□□□□ -2
GTF2A1P52655 MIR6810-201ENST00000622701 70 ntBASIC2.57□□□□□ -2
GTF2A1P52655 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.57□□□□□ -2
GTF2A1P52655 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.57□□□□□ -2
GTF2A1P52655 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.57□□□□□ -2
GTF2A1P52655 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
GTF2A1P52655 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.57□□□□□ -2
GTF2A1P52655 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.57□□□□□ -2
GTF2A1P52655 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
GTF2A1P52655 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
GTF2A1P52655 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.56□□□□□ -2
GTF2A1P52655 AL109809.4-201ENST00000603520 2185 ntBASIC2.56□□□□□ -2
GTF2A1P52655 AL049781.1-201ENST00000623195 3585 ntBASIC2.56□□□□□ -2
GTF2A1P52655 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.56□□□□□ -2
GTF2A1P52655 MIR26A1-201ENST00000362205 77 ntBASIC2.56□□□□□ -2
GTF2A1P52655 SNORA54-201ENST00000384281 123 ntBASIC2.56□□□□□ -2
GTF2A1P52655 RNU2-21P-201ENST00000410368 188 ntBASIC2.56□□□□□ -2
GTF2A1P52655 RAB28P1-201ENST00000411517 641 ntBASIC2.56□□□□□ -2
GTF2A1P52655 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.56□□□□□ -2
GTF2A1P52655 SRIP2-201ENST00000428470 166 ntBASIC2.56□□□□□ -2
GTF2A1P52655 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.56□□□□□ -2
GTF2A1P52655 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.56□□□□□ -2
GTF2A1P52655 AL035407.2-201ENST00000454090 378 ntBASIC2.56□□□□□ -2
GTF2A1P52655 AC096992.1-201ENST00000459808 709 ntBASIC2.56□□□□□ -2
GTF2A1P52655 AC090515.1-201ENST00000465295 476 ntBASIC2.56□□□□□ -2
GTF2A1P52655 AL133372.1-201ENST00000493565 745 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms