Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MTATP6P30-201ENST00000443540 664 ntBASIC3.93□□□□□ -1.78
SOX2P48431 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.93□□□□□ -1.78
SOX2P48431 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.93□□□□□ -1.78
SOX2P48431 SCARNA10-201ENST00000459255 330 ntBASIC3.93□□□□□ -1.78
SOX2P48431 AL672167.3-201ENST00000465951 960 ntBASIC3.93□□□□□ -1.78
SOX2P48431 AC146507.1-201ENST00000468335 354 ntBASIC3.93□□□□□ -1.78
SOX2P48431 RPS26P39-201ENST00000469206 341 ntBASIC3.93□□□□□ -1.78
SOX2P48431 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.93□□□□□ -1.78
SOX2P48431 RN7SL727P-201ENST00000482164 296 ntBASIC3.93□□□□□ -1.78
SOX2P48431 RPL23AP41-201ENST00000484754 458 ntBASIC3.93□□□□□ -1.78
SOX2P48431 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.93□□□□□ -1.78
SOX2P48431 COX7A2P2-201ENST00000505291 250 ntBASIC3.93□□□□□ -1.78
SOX2P48431 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.93□□□□□ -1.78
SOX2P48431 HIGD1AP3-201ENST00000515857 278 ntBASIC3.93□□□□□ -1.78
SOX2P48431 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.93□□□□□ -1.78
SOX2P48431 AC021006.3-201ENST00000530771 192 ntBASIC3.93□□□□□ -1.78
SOX2P48431 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SOX2P48431 AC008033.2-201ENST00000542626 177 ntBASIC3.93□□□□□ -1.78
SOX2P48431 AC123904.2-201ENST00000548059 300 ntBASIC3.93□□□□□ -1.78
SOX2P48431 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.93□□□□□ -1.78
SOX2P48431 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.93□□□□□ -1.78
SOX2P48431 AL161713.1-201ENST00000555538 145 ntBASIC3.93□□□□□ -1.78
SOX2P48431 AC105129.1-201ENST00000560250 297 ntBASIC3.93□□□□□ -1.78
SOX2P48431 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.93□□□□□ -1.78
SOX2P48431 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.93□□□□□ -1.78
SOX2P48431 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.93□□□□□ -1.78
SOX2P48431 AC099489.2-201ENST00000574976 260 ntBASIC3.93□□□□□ -1.78
SOX2P48431 SNORA59B-202ENST00000578183 701 ntBASIC3.93□□□□□ -1.78
SOX2P48431 ELOCP28-201ENST00000590044 317 ntBASIC3.93□□□□□ -1.78
SOX2P48431 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.93□□□□□ -1.78
SOX2P48431 AC004853.1-201ENST00000604902 698 ntBASIC3.93□□□□□ -1.78
SOX2P48431 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.93□□□□□ -1.78
SOX2P48431 AL161734.1-201ENST00000609720 557 ntBASIC3.93□□□□□ -1.78
SOX2P48431 AC016769.4-201ENST00000616893 535 ntBASIC3.93□□□□□ -1.78
SOX2P48431 AL732618.1-201ENST00000623251 301 ntBASIC3.93□□□□□ -1.78
SOX2P48431 AC079597.1-201ENST00000624306 508 ntBASIC3.93□□□□□ -1.78
SOX2P48431 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.93□□□□□ -1.78
SOX2P48431 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SOX2P48431 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.93□□□□□ -1.78
SOX2P48431 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX2P48431 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.93□□□□□ -1.78
SOX2P48431 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX2P48431 AC024560.2-201ENST00000507981 1497 ntBASIC3.92□□□□□ -1.78
SOX2P48431 MTND5P33-201ENST00000571250 1450 ntBASIC3.92□□□□□ -1.78
SOX2P48431 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.92□□□□□ -1.78
SOX2P48431 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SOX2P48431 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SOX2P48431 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SOX2P48431 Y_RNA.9-201ENST00000362354 101 ntBASIC3.92□□□□□ -1.78
SOX2P48431 RNA5SP52-201ENST00000362448 134 ntBASIC3.92□□□□□ -1.78
SOX2P48431 SNORA71.2-201ENST00000364941 134 ntBASIC3.92□□□□□ -1.78
SOX2P48431 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SOX2P48431 MTCO3P40-201ENST00000392516 676 ntBASIC3.92□□□□□ -1.78
SOX2P48431 RPL23AP32-201ENST00000395315 459 ntBASIC3.92□□□□□ -1.78
SOX2P48431 GLULP6-201ENST00000399502 913 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AL049693.1-201ENST00000402760 611 ntBASIC3.92□□□□□ -1.78
SOX2P48431 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SOX2P48431 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.92□□□□□ -1.78
SOX2P48431 RN7SKP235-201ENST00000410662 305 ntBASIC3.92□□□□□ -1.78
SOX2P48431 RNU4-55P-201ENST00000410731 137 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AC127391.1-201ENST00000411737 98 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.92□□□□□ -1.78
SOX2P48431 AC127526.1-201ENST00000417526 366 ntBASIC3.92□□□□□ -1.78
SOX2P48431 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.92□□□□□ -1.78
SOX2P48431 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.92□□□□□ -1.78
SOX2P48431 DPPA2P1-201ENST00000428060 556 ntBASIC3.92□□□□□ -1.78
SOX2P48431 RPL31P35-201ENST00000431058 377 ntBASIC3.92□□□□□ -1.78
SOX2P48431 EZH2P1-201ENST00000431167 291 ntBASIC3.92□□□□□ -1.78
SOX2P48431 HLA-N-201ENST00000437516 135 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AC114495.1-201ENST00000441274 436 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AL353572.1-201ENST00000442490 417 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AC112653.1-201ENST00000443851 386 ntBASIC3.92□□□□□ -1.78
SOX2P48431 Z95327.1-201ENST00000446082 482 ntBASIC3.92□□□□□ -1.78
SOX2P48431 Z99127.3-201ENST00000448158 395 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AC079448.1-201ENST00000449377 373 ntBASIC3.92□□□□□ -1.78
SOX2P48431 FABP3P2-201ENST00000453169 399 ntBASIC3.92□□□□□ -1.78
SOX2P48431 C1DP4-201ENST00000455429 424 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AL359385.1-201ENST00000456509 365 ntBASIC3.92□□□□□ -1.78
SOX2P48431 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.92□□□□□ -1.78
SOX2P48431 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.92□□□□□ -1.78
SOX2P48431 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SOX2P48431 RPSAP50-201ENST00000481955 852 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SOX2P48431 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.92□□□□□ -1.78
SOX2P48431 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.92□□□□□ -1.78
SOX2P48431 PTGES3P3-201ENST00000511479 482 ntBASIC3.92□□□□□ -1.78
SOX2P48431 SAP18P1-201ENST00000512058 390 ntBASIC3.92□□□□□ -1.78
SOX2P48431 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AP000907.2-201ENST00000530827 353 ntBASIC3.92□□□□□ -1.78
SOX2P48431 OR5AN2P-201ENST00000534535 896 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.92□□□□□ -1.78
SOX2P48431 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.92□□□□□ -1.78
SOX2P48431 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.92□□□□□ -1.78
SOX2P48431 MTCO3P24-201ENST00000572729 782 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.92□□□□□ -1.78
SOX2P48431 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.92□□□□□ -1.78
SOX2P48431 RPL26P30-202ENST00000602923 645 ntBASIC3.92□□□□□ -1.78
SOX2P48431 SUMO2P15-201ENST00000604285 278 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AC011816.2-201ENST00000607089 556 ntBASIC3.92□□□□□ -1.78
SOX2P48431 Z98200.1-201ENST00000607298 470 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms