Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SNORA54-201ENST00000384281 123 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 RNU6-906P-201ENST00000384700 70 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 RNU4-47P-201ENST00000410876 114 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 RNU4-22P-201ENST00000411058 166 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 RNA5SP107-201ENST00000411358 122 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.72□□□□□ -1.81
NEDD4P46934 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.72□□□□□ -1.81
NEDD4P46934 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.72□□□□□ -1.81
NEDD4P46934 AL512649.1-201ENST00000428997 581 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 RPL23AP69-201ENST00000431134 458 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 AL513175.1-201ENST00000431492 780 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 EEF1A1P39-201ENST00000440791 250 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.72□□□□□ -1.81
NEDD4P46934 EXTL2P1-201ENST00000446218 416 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 RPL7P59-201ENST00000447700 943 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.72□□□□□ -1.81
NEDD4P46934 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
NEDD4P46934 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.72□□□□□ -1.81
NEDD4P46934 Z99714.1-201ENST00000450463 807 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.72□□□□□ -1.81
NEDD4P46934 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.72□□□□□ -1.81
NEDD4P46934 AC005351.1-201ENST00000511152 786 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 RNU6-311P-201ENST00000516224 102 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.72□□□□□ -1.81
NEDD4P46934 MIR5195-201ENST00000583555 115 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.72□□□□□ -1.81
NEDD4P46934 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.72□□□□□ -1.81
NEDD4P46934 AC008687.2-201ENST00000597865 520 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 AC013244.3-201ENST00000605614 388 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 AC016877.3-201ENST00000606778 504 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.72□□□□□ -1.81
NEDD4P46934 AC138932.5-201ENST00000617759 563 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 AC018692.3-201ENST00000623929 123 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.72□□□□□ -1.81
NEDD4P46934 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NEDD4P46934 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 AL355578.1-201ENST00000607405 1328 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 MTND4P8-201ENST00000514997 1362 ntBASIC3.72□□□□□ -1.81
NEDD4P46934 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
NEDD4P46934 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NEDD4P46934 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.72□□□□□ -1.81
NEDD4P46934 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.72□□□□□ -1.81
NEDD4P46934 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
NEDD4P46934 RNU6-839P-201ENST00000363347 108 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 RN7SKP44-201ENST00000363602 316 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 RNU6-707P-201ENST00000364647 95 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.71□□□□□ -1.81
NEDD4P46934 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
NEDD4P46934 SNORA9-201ENST00000384215 133 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 Y_RNA.472-201ENST00000384322 102 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 SNORA11.1-201ENST00000408133 129 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 AL592310.1-201ENST00000414330 671 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 AC008280.1-201ENST00000418851 412 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 KRR1P1-201ENST00000419430 803 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 AL353678.1-201ENST00000422735 741 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.71□□□□□ -1.81
NEDD4P46934 DPRXP1-201ENST00000426312 460 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 Z93242.1-201ENST00000427102 353 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.71□□□□□ -1.81
NEDD4P46934 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.71□□□□□ -1.81
NEDD4P46934 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.71□□□□□ -1.81
NEDD4P46934 ELOCP23-201ENST00000452014 332 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 OFD1P3Y-201ENST00000453312 783 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 AP000893.1-201ENST00000474462 794 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 RPS4XP22-201ENST00000480755 780 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.71□□□□□ -1.81
NEDD4P46934 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.71□□□□□ -1.81
NEDD4P46934 SNORA64.4-201ENST00000516632 81 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 RN7SKP289-201ENST00000517244 295 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 RN7SKP57-201ENST00000517248 293 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.71□□□□□ -1.81
NEDD4P46934 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.71□□□□□ -1.81
NEDD4P46934 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.71□□□□□ -1.81
NEDD4P46934 AC007424.1-203ENST00000554613 687 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 MTND3P13-201ENST00000574391 343 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 AC124312.4-201ENST00000605533 310 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.71□□□□□ -1.81
NEDD4P46934 MIR8057-201ENST00000620957 69 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.71□□□□□ -1.81
NEDD4P46934 AC008993.2-201ENST00000631744 806 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 AC068620.4-201ENST00000636730 1182 ntBASIC3.71□□□□□ -1.81
NEDD4P46934 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
NEDD4P46934 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.71□□□□□ -1.82
NEDD4P46934 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NEDD4P46934 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.71□□□□□ -1.82
NEDD4P46934 AC107081.3-201ENST00000612715 2034 ntBASIC3.71□□□□□ -1.82
NEDD4P46934 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NEDD4P46934 SNORA38.1-201ENST00000364172 131 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 snoZ40.1-201ENST00000364540 72 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 RNU6-761P-201ENST00000384148 107 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 MIR217-201ENST00000384817 110 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NEDD4P46934 SNORD67-201ENST00000390833 111 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 SNORA40.2-201ENST00000390847 128 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 AC084290.1-201ENST00000434995 374 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD4P46934 AC006028.1-201ENST00000438379 402 ntBASIC3.7□□□□□ -1.82
NEDD4P46934 USP9YP22-201ENST00000438971 294 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms