Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.62□□□□□ -1.83
CHRNA3P32297 SULT1C2P1-202ENST00000562418 459 ntBASIC3.62□□□□□ -1.83
CHRNA3P32297 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.62□□□□□ -1.83
CHRNA3P32297 AC128687.1-201ENST00000605304 619 ntBASIC3.62□□□□□ -1.83
CHRNA3P32297 AP002802.2-201ENST00000605877 235 ntBASIC3.62□□□□□ -1.83
CHRNA3P32297 MIR7851-201ENST00000610611 160 ntBASIC3.62□□□□□ -1.83
CHRNA3P32297 AC084757.4-201ENST00000616350 526 ntBASIC3.62□□□□□ -1.83
CHRNA3P32297 AC009318.4-201ENST00000620496 486 ntBASIC3.62□□□□□ -1.83
CHRNA3P32297 AC010608.3-201ENST00000625048 527 ntBASIC3.62□□□□□ -1.83
CHRNA3P32297 AC126544.2-201ENST00000625174 749 ntBASIC3.62□□□□□ -1.83
CHRNA3P32297 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.62□□□□□ -1.83
CHRNA3P32297 AC099654.9-201ENST00000637055 678 ntBASIC3.62□□□□□ -1.83
CHRNA3P32297 AC099654.8-201ENST00000637757 681 ntBASIC3.62□□□□□ -1.83
CHRNA3P32297 AC006927.2-201ENST00000639256 389 ntBASIC3.62□□□□□ -1.83
CHRNA3P32297 AC139713.2-210ENST00000641741 992 ntBASIC3.62□□□□□ -1.83
CHRNA3P32297 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA3P32297 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA3P32297 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA3P32297 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA3P32297 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA3P32297 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHRNA3P32297 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.62□□□□□ -1.83
CHRNA3P32297 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRNA3P32297 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CHRNA3P32297 AL672296.1-201ENST00000427780 2158 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA3P32297 RNU5E-10P-201ENST00000363506 118 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 RNA5SP107-201ENST00000411358 122 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 DBIP2-201ENST00000419076 262 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 AC027644.1-201ENST00000419595 298 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.61□□□□□ -1.83
CHRNA3P32297 RPS15AP6-201ENST00000420703 385 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.61□□□□□ -1.83
CHRNA3P32297 ARF4P4-201ENST00000439608 520 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 TXNP1-201ENST00000441872 371 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 PRDX3P3-201ENST00000447765 522 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRNA3P32297 CYCSP35-201ENST00000451978 304 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.61□□□□□ -1.83
CHRNA3P32297 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRNA3P32297 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA3P32297 GTF2IP9-201ENST00000502460 301 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 AC069306.1-201ENST00000507006 843 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 HMGB3P15-201ENST00000507326 574 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRNA3P32297 AC010376.1-201ENST00000522101 334 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.61□□□□□ -1.83
CHRNA3P32297 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA3P32297 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA3P32297 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA3P32297 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.61□□□□□ -1.83
CHRNA3P32297 SYF2P1-201ENST00000550658 413 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.61□□□□□ -1.83
CHRNA3P32297 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.61□□□□□ -1.83
CHRNA3P32297 AC090666.1-201ENST00000578241 445 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.61□□□□□ -1.83
CHRNA3P32297 AC027449.1-201ENST00000608890 407 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 AC124016.2-201ENST00000610058 665 ntBASIC3.61□□□□□ -1.83
CHRNA3P32297 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA3P32297 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA3P32297 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.61□□□□□ -1.83
CHRNA3P32297 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CHRNA3P32297 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA3P32297 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHRNA3P32297 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNA3P32297 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNA3P32297 AC032011.1-201ENST00000611703 1549 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNA3P32297 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNA3P32297 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CHRNA3P32297 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHRNA3P32297 FRG1CP-201ENST00000358464 769 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 RNU6-805P-201ENST00000365643 106 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CHRNA3P32297 PTMAP5-201ENST00000393073 333 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 RPS7P15-201ENST00000415804 584 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 RPL31P54-201ENST00000429803 370 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRNA3P32297 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRNA3P32297 AC127537.2-201ENST00000439258 465 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 AC004854.1-201ENST00000440356 349 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRNA3P32297 PRSS3P4-201ENST00000453323 162 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 snoU13.22-201ENST00000459428 104 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 PABPC1P3-201ENST00000469174 459 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 AC104982.1-201ENST00000478775 574 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.6□□□□□ -1.83
CHRNA3P32297 MTCO2P32-201ENST00000514865 403 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.6□□□□□ -1.83
CHRNA3P32297 MTND2P32-201ENST00000521584 1038 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.6□□□□□ -1.83
CHRNA3P32297 AL121603.1-201ENST00000553815 142 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.6□□□□□ -1.83
CHRNA3P32297 AP003973.1-201ENST00000604639 691 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 AP000238.1-201ENST00000608759 426 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 RNU6-1192P-201ENST00000612197 107 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 RNU6-489P-201ENST00000618289 107 ntBASIC3.6□□□□□ -1.83
CHRNA3P32297 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CHRNA3P32297 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.6□□□□□ -1.83
CHRNA3P32297 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms