Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC12P31275 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HOXC12P31275 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 AC009951.1-201ENST00000623674 2614 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
HOXC12P31275 AC000374.1-201ENST00000434698 1745 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
HOXC12P31275 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.88□□□□□ -1.63
HOXC12P31275 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
HOXC12P31275 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC12P31275 AC092681.1-201ENST00000297369 291 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AC073343.1-201ENST00000328239 651 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 RNU6-552P-201ENST00000362869 119 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 Y_RNA.67-201ENST00000362870 100 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 RNU4-20P-201ENST00000365601 151 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 RNU6-637P-201ENST00000384050 107 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 RNU6-1029P-201ENST00000384109 107 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 MIR765-201ENST00000390226 114 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 RNU6-903P-201ENST00000391270 109 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 ARL4AP5-201ENST00000404372 599 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AL606923.1-201ENST00000406616 190 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC12P31275 RPL23AP38-201ENST00000423801 469 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AC005517.2-201ENST00000424673 553 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AC092651.1-201ENST00000426110 312 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 RPS11P7-201ENST00000442125 465 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 CEACAMP7-201ENST00000444105 496 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC12P31275 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC12P31275 AC010655.1-201ENST00000449336 292 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AC234775.1-201ENST00000454247 670 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC12P31275 AC005008.1-201ENST00000456151 612 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 RPL36AP13-201ENST00000457490 317 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC12P31275 HMGB1P25-201ENST00000468402 607 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AC007537.2-201ENST00000472093 511 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.88□□□□□ -1.63
HOXC12P31275 RPS4XP1-201ENST00000482189 787 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 RN7SL97P-201ENST00000486780 299 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AC092436.1-201ENST00000506450 503 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 PGAM1P13-201ENST00000507497 754 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.88□□□□□ -1.63
HOXC12P31275 RN7SKP116-201ENST00000516902 319 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 DEFB108D-201ENST00000527787 222 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC12P31275 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC12P31275 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC12P31275 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC12P31275 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC12P31275 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC12P31275 AC090948.1-201ENST00000607464 549 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 MIR6820-201ENST00000611508 62 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AC093838.1-201ENST00000613014 469 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AL603758.1-201ENST00000618654 241 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC12P31275 U6.114-201ENST00000636407 96 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC12P31275 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HOXC12P31275 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC12P31275 AC007938.2-201ENST00000604666 2634 ntBASIC4.88□□□□□ -1.63
HOXC12P31275 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC12P31275 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC12P31275 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC12P31275 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC12P31275 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
HOXC12P31275 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HOXC12P31275 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC12P31275 RNU6-263P-201ENST00000363811 107 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 RNA5SP234-201ENST00000363916 119 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 Y_RNA.373-201ENST00000365600 103 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC12P31275 GLULP6-201ENST00000399502 913 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 AL645733.1-201ENST00000402250 217 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC12P31275 RNU4-26P-201ENST00000410270 107 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 RNU4-78P-201ENST00000410940 126 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 NDUFB4P5-201ENST00000415445 361 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 AC068533.1-201ENST00000418542 415 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC12P31275 RPS27AP12-201ENST00000429552 465 ntBASIC4.87□□□□□ -1.63
HOXC12P31275 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms