Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 RNA5SP341-201ENST00000516261 117 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 SNORA31.20-201ENST00000517111 133 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 IGKV2D-36-201ENST00000518643 226 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 CR383656.14-201ENST00000551951 406 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 MTCO3P13-201ENST00000577757 781 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 MIR4325-201ENST00000583049 90 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC125494.3-201ENST00000602759 455 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 AC018618.2-201ENST00000604770 446 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 VIS1.1-201ENST00000610517 203 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 AL110115.1-201ENST00000614396 364 ntBASIC2.28□□□□□ -2.04
HLA-DMBP28068 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HLA-DMBP28068 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
HLA-DMBP28068 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DMBP28068 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DMBP28068 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DMBP28068 SNORA7.4-201ENST00000384249 137 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 RNU6-837P-201ENST00000391056 108 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HLA-DMBP28068 NDUFB4P4-201ENST00000404822 243 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AL138885.1-201ENST00000405921 675 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AL353692.2-201ENST00000407054 335 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AL591034.1-201ENST00000407447 340 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 RNA5SP56-201ENST00000410277 118 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 RNU4-65P-201ENST00000410473 140 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.27□□□□□ -2.05
HLA-DMBP28068 AC073264.1-201ENST00000411508 416 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 OR4K6P-201ENST00000416478 897 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 MRPL50P2-201ENST00000416821 482 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 RFESDP1-201ENST00000422350 461 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 RPL7P44-201ENST00000424827 742 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DMBP28068 AC127537.2-201ENST00000439258 465 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 RPL17P49-201ENST00000443728 411 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 RPS26P56-201ENST00000444468 240 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DMBP28068 RPL39P40-201ENST00000445481 146 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AC092685.1-201ENST00000447960 1243 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 RPL37P4-201ENST00000448908 268 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AC140076.1-201ENST00000449897 361 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 HMGB1P15-201ENST00000453854 435 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AC008280.2-201ENST00000455473 307 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 HMGB1P25-201ENST00000468402 607 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 RPL27AP5-201ENST00000469428 449 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 RPL7P23-201ENST00000493874 747 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DMBP28068 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.27□□□□□ -2.05
HLA-DMBP28068 SNORD59.2-201ENST00000516873 68 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 OR5AK3P-201ENST00000527486 1297 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DMBP28068 MIR4504-201ENST00000577413 92 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DMBP28068 AC005242.1-201ENST00000585658 438 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AC079610.2-201ENST00000604818 690 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DMBP28068 AL513477.2-201ENST00000607858 568 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AC107871.2-201ENST00000612894 502 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AC004696.1-201ENST00000614345 607 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AC009032.1-201ENST00000617574 431 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 AL161431.1-201ENST00000618966 4205 ntBASIC2.27□□□□□ -2.05
HLA-DMBP28068 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DMBP28068 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DMBP28068 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DMBP28068 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DMBP28068 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 AC104446.1-201ENST00000613728 1321 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DMBP28068 RNU6-50P-201ENST00000362356 103 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 RPL7P25-201ENST00000404151 721 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 RPL7P8-201ENST00000411964 730 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 AC109780.2-201ENST00000413467 845 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 AC233728.2-201ENST00000425348 757 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 DUTP6-201ENST00000425573 462 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 RSL24D1P2-201ENST00000445584 366 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 AC068135.1-201ENST00000446164 246 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 RPL23AP15-201ENST00000450202 459 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 AL136126.1-201ENST00000473603 402 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 RNF138P1-201ENST00000502765 546 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DMBP28068 MTCO1P31-201ENST00000506355 492 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 AC133963.2-201ENST00000513686 578 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 AP002404.1-201ENST00000532005 451 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms