Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.62□□□□□ -1.67
POLR2AP24928 AC106782.4-201ENST00000568264 210 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
POLR2AP24928 AP001004.1-201ENST00000582468 324 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
POLR2AP24928 PART1_1.1-201ENST00000611761 217 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 AC079684.1-201ENST00000621405 437 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 AC019278.1-201ENST00000623516 479 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.62□□□□□ -1.67
POLR2AP24928 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
POLR2AP24928 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.61□□□□□ -1.67
POLR2AP24928 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.61□□□□□ -1.67
POLR2AP24928 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
POLR2AP24928 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
POLR2AP24928 MARK2P15-201ENST00000432204 2186 ntBASIC4.61□□□□□ -1.67
POLR2AP24928 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.61□□□□□ -1.67
POLR2AP24928 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
POLR2AP24928 ZNF962P-201ENST00000443465 3140 ntBASIC4.61□□□□□ -1.67
POLR2AP24928 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
POLR2AP24928 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
POLR2AP24928 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
POLR2AP24928 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
POLR2AP24928 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
POLR2AP24928 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
POLR2AP24928 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
POLR2AP24928 RNU6-348P-201ENST00000384386 107 ntBASIC4.61□□□□□ -1.67
POLR2AP24928 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
POLR2AP24928 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.61□□□□□ -1.67
POLR2AP24928 AC068533.2-201ENST00000411872 306 ntBASIC4.61□□□□□ -1.67
POLR2AP24928 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.61□□□□□ -1.67
POLR2AP24928 AC083875.1-201ENST00000419509 405 ntBASIC4.61□□□□□ -1.67
POLR2AP24928 AL353093.1-201ENST00000441292 436 ntBASIC4.61□□□□□ -1.67
POLR2AP24928 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.61□□□□□ -1.67
POLR2AP24928 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.61□□□□□ -1.67
POLR2AP24928 TPT1P14-201ENST00000448018 505 ntBASIC4.61□□□□□ -1.67
POLR2AP24928 snoU109.1-201ENST00000459339 135 ntBASIC4.61□□□□□ -1.67
POLR2AP24928 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.61□□□□□ -1.67
POLR2AP24928 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.61□□□□□ -1.67
POLR2AP24928 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
POLR2AP24928 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.61□□□□□ -1.67
POLR2AP24928 NDUFB4P2-201ENST00000509515 391 ntBASIC4.61□□□□□ -1.67
POLR2AP24928 IGJP1-201ENST00000522682 475 ntBASIC4.61□□□□□ -1.67
POLR2AP24928 ARL2BPP5-201ENST00000523141 481 ntBASIC4.61□□□□□ -1.67
POLR2AP24928 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.61□□□□□ -1.67
POLR2AP24928 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.61□□□□□ -1.67
POLR2AP24928 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.61□□□□□ -1.67
POLR2AP24928 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.61□□□□□ -1.67
POLR2AP24928 MIR4472-2-201ENST00000582069 67 ntBASIC4.61□□□□□ -1.67
POLR2AP24928 NRBF2P1-201ENST00000587407 859 ntBASIC4.61□□□□□ -1.67
POLR2AP24928 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
POLR2AP24928 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
POLR2AP24928 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
POLR2AP24928 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
POLR2AP24928 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.61□□□□□ -1.67
POLR2AP24928 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
POLR2AP24928 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
POLR2AP24928 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
POLR2AP24928 AC004656.1-201ENST00000568479 4951 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
POLR2AP24928 AL157700.1-201ENST00000561973 1432 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
POLR2AP24928 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
POLR2AP24928 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
POLR2AP24928 RNU6-543P-201ENST00000362576 108 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 SNORD96B-201ENST00000386148 79 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AL109913.1-201ENST00000421173 514 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.6□□□□□ -1.67
POLR2AP24928 SLC31A1P1-201ENST00000451221 567 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 CYCSP35-201ENST00000451978 304 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 CALM1P2-201ENST00000452941 448 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AC097493.1-201ENST00000463958 372 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AC005726.1-201ENST00000494679 427 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AC025465.4-201ENST00000513422 638 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.6□□□□□ -1.67
POLR2AP24928 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
POLR2AP24928 AC068587.4-201ENST00000533893 186 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AL357080.1-201ENST00000617394 239 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.6□□□□□ -1.67
POLR2AP24928 AC119674.1-207ENST00000641355 633 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.6□□□□□ -1.67
POLR2AP24928 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.6□□□□□ -1.67
POLR2AP24928 AC006484.1-201ENST00000435086 1884 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AC245100.2-201ENST00000454544 1679 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
POLR2AP24928 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
POLR2AP24928 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
POLR2AP24928 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.6□□□□□ -1.67
POLR2AP24928 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
POLR2AP24928 AC010266.2-201ENST00000564741 3255 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
POLR2AP24928 RNU5F-6P-201ENST00000362979 116 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 Y_RNA.535-201ENST00000384612 99 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 SNORA40.3-201ENST00000390964 122 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.6□□□□□ -1.67
POLR2AP24928 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.6□□□□□ -1.67
POLR2AP24928 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 DPY19L1P2-201ENST00000426647 915 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.6□□□□□ -1.67
POLR2AP24928 COX6CP12-201ENST00000446748 202 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 DPPA3P1-201ENST00000448050 469 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms