Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RFX1P22670 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RFX1P22670 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RFX1P22670 XIAPP3-201ENST00000312918 795 ntBASIC6.12□□□□□ -1.43
RFX1P22670 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RFX1P22670 RN7SKP115-201ENST00000363177 317 ntBASIC6.12□□□□□ -1.43
RFX1P22670 RNA5SP30-201ENST00000365552 115 ntBASIC6.12□□□□□ -1.43
RFX1P22670 RNU6-474P-201ENST00000384243 107 ntBASIC6.12□□□□□ -1.43
RFX1P22670 MIR606-201ENST00000384851 96 ntBASIC6.12□□□□□ -1.43
RFX1P22670 AC005042.1-201ENST00000393397 800 ntBASIC6.12□□□□□ -1.43
RFX1P22670 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RFX1P22670 Y_RNA.625-201ENST00000411256 107 ntBASIC6.12□□□□□ -1.43
RFX1P22670 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.12□□□□□ -1.43
RFX1P22670 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFX1P22670 VN1R36P-201ENST00000414936 291 ntBASIC6.12□□□□□ -1.43
RFX1P22670 AL137014.1-201ENST00000420490 1226 ntBASIC6.12□□□□□ -1.43
RFX1P22670 AL662874.1-201ENST00000426065 230 ntBASIC6.12□□□□□ -1.43
RFX1P22670 AL360081.1-201ENST00000428299 555 ntBASIC6.12□□□□□ -1.43
RFX1P22670 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.12□□□□□ -1.43
RFX1P22670 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6.12□□□□□ -1.43
RFX1P22670 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC6.12□□□□□ -1.43
RFX1P22670 AC011225.1-201ENST00000457751 369 ntBASIC6.12□□□□□ -1.43
RFX1P22670 Y_RNA.635-201ENST00000459041 101 ntBASIC6.12□□□□□ -1.43
RFX1P22670 AC008481.1-201ENST00000463278 396 ntBASIC6.12□□□□□ -1.43
RFX1P22670 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFX1P22670 AC022215.1-201ENST00000481770 362 ntBASIC6.12□□□□□ -1.43
RFX1P22670 AC009120.1-201ENST00000493458 473 ntBASIC6.12□□□□□ -1.43
RFX1P22670 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFX1P22670 IGBP1P4-201ENST00000503202 879 ntBASIC6.12□□□□□ -1.43
RFX1P22670 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC6.12□□□□□ -1.43
RFX1P22670 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.12□□□□□ -1.43
RFX1P22670 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.12□□□□□ -1.43
RFX1P22670 RNU6-685P-201ENST00000517088 95 ntBASIC6.12□□□□□ -1.43
RFX1P22670 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RFX1P22670 AP000889.2-201ENST00000532684 490 ntBASIC6.12□□□□□ -1.43
RFX1P22670 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.12□□□□□ -1.43
RFX1P22670 MIR4311-201ENST00000580794 100 ntBASIC6.12□□□□□ -1.43
RFX1P22670 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFX1P22670 AC174048.1-201ENST00000603389 144 ntBASIC6.12□□□□□ -1.43
RFX1P22670 AP001330.4-201ENST00000604350 154 ntBASIC6.12□□□□□ -1.43
RFX1P22670 AP001521.2-201ENST00000608772 546 ntBASIC6.12□□□□□ -1.43
RFX1P22670 MIR7155-201ENST00000615925 56 ntBASIC6.12□□□□□ -1.43
RFX1P22670 RN7SL544P-201ENST00000617232 284 ntBASIC6.12□□□□□ -1.43
RFX1P22670 RN7SL763P-201ENST00000620922 284 ntBASIC6.12□□□□□ -1.43
RFX1P22670 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.12□□□□□ -1.43
RFX1P22670 MIR4275-201ENST00000636486 87 ntBASIC6.12□□□□□ -1.43
RFX1P22670 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RFX1P22670 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
RFX1P22670 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.12□□□□□ -1.43
RFX1P22670 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.12□□□□□ -1.43
RFX1P22670 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFX1P22670 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RFX1P22670 AL592437.2-201ENST00000421655 2434 ntBASIC6.11□□□□□ -1.43
RFX1P22670 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
RFX1P22670 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFX1P22670 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RFX1P22670 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RFX1P22670 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC6.11□□□□□ -1.43
RFX1P22670 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFX1P22670 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.11□□□□□ -1.43
RFX1P22670 AL159987.1-201ENST00000347911 293 ntBASIC6.11□□□□□ -1.43
RFX1P22670 SNORA4.3-201ENST00000365564 137 ntBASIC6.11□□□□□ -1.43
RFX1P22670 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFX1P22670 RNU6-171P-201ENST00000384354 107 ntBASIC6.11□□□□□ -1.43
RFX1P22670 RNU6-738P-201ENST00000384531 106 ntBASIC6.11□□□□□ -1.43
RFX1P22670 SNORA75.4-201ENST00000391278 119 ntBASIC6.11□□□□□ -1.43
RFX1P22670 UBE2V1P2-201ENST00000397758 440 ntBASIC6.11□□□□□ -1.43
RFX1P22670 RPL37P18-201ENST00000411602 243 ntBASIC6.11□□□□□ -1.43
RFX1P22670 OR6E1P-201ENST00000414424 923 ntBASIC6.11□□□□□ -1.43
RFX1P22670 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.11□□□□□ -1.43
RFX1P22670 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.11□□□□□ -1.43
RFX1P22670 HMGB3P11-201ENST00000440127 604 ntBASIC6.11□□□□□ -1.43
RFX1P22670 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.11□□□□□ -1.43
RFX1P22670 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFX1P22670 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.11□□□□□ -1.43
RFX1P22670 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.11□□□□□ -1.43
RFX1P22670 AC027575.1-201ENST00000481064 460 ntBASIC6.11□□□□□ -1.43
RFX1P22670 HIGD1AP14-201ENST00000507617 282 ntBASIC6.11□□□□□ -1.43
RFX1P22670 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC6.11□□□□□ -1.43
RFX1P22670 AC108078.2-201ENST00000510750 236 ntBASIC6.11□□□□□ -1.43
RFX1P22670 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6.11□□□□□ -1.43
RFX1P22670 AC021678.3-201ENST00000517893 476 ntBASIC6.11□□□□□ -1.43
RFX1P22670 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.11□□□□□ -1.43
RFX1P22670 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.11□□□□□ -1.43
RFX1P22670 AC122688.1-201ENST00000541494 223 ntBASIC6.11□□□□□ -1.43
RFX1P22670 AL121576.1-201ENST00000556055 276 ntBASIC6.11□□□□□ -1.43
RFX1P22670 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.11□□□□□ -1.43
RFX1P22670 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6.11□□□□□ -1.43
RFX1P22670 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.11□□□□□ -1.43
RFX1P22670 MIR3942-201ENST00000585264 109 ntBASIC6.11□□□□□ -1.43
RFX1P22670 AL034351.1-201ENST00000605288 668 ntBASIC6.11□□□□□ -1.43
RFX1P22670 AC116312.1-201ENST00000606841 314 ntBASIC6.11□□□□□ -1.43
RFX1P22670 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.11□□□□□ -1.43
RFX1P22670 AL627230.1-201ENST00000613077 211 ntBASIC6.11□□□□□ -1.43
RFX1P22670 AC084781.2-201ENST00000615568 161 ntBASIC6.11□□□□□ -1.43
RFX1P22670 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.11□□□□□ -1.43
RFX1P22670 RNA5SP439-201ENST00000617595 124 ntBASIC6.11□□□□□ -1.43
RFX1P22670 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC6.11□□□□□ -1.43
RFX1P22670 MTND4LP32-201ENST00000636111 270 ntBASIC6.11□□□□□ -1.43
RFX1P22670 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms