Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.07□□□□□ -1.6
ATP2A2P16615 MTCO3P24-201ENST00000572729 782 ntBASIC5.07□□□□□ -1.6
ATP2A2P16615 RN7SL176P-201ENST00000580352 264 ntBASIC5.07□□□□□ -1.6
ATP2A2P16615 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.07□□□□□ -1.6
ATP2A2P16615 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.07□□□□□ -1.6
ATP2A2P16615 AP002360.4-201ENST00000606980 481 ntBASIC5.07□□□□□ -1.6
ATP2A2P16615 RNU6-87P-201ENST00000607561 108 ntBASIC5.07□□□□□ -1.6
ATP2A2P16615 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATP2A2P16615 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATP2A2P16615 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
ATP2A2P16615 ELF2P3-201ENST00000445099 1506 ntBASIC5.07□□□□□ -1.6
ATP2A2P16615 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.07□□□□□ -1.6
ATP2A2P16615 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATP2A2P16615 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.06□□□□□ -1.6
ATP2A2P16615 AC004520.1-201ENST00000608362 1413 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 AL672167.1-205ENST00000641112 3080 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 AC022893.2-201ENST00000564832 3296 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 SNORD82-201ENST00000365530 70 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATP2A2P16615 RPL7P25-201ENST00000404151 721 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 GSTA9P-201ENST00000406231 611 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 CYP4F29P-201ENST00000420685 446 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 CKS1BP6-201ENST00000424932 240 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 TIMM9P3-201ENST00000428659 274 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.06□□□□□ -1.6
ATP2A2P16615 AL596276.1-201ENST00000434465 418 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 AL451139.1-201ENST00000434718 346 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 RBMX2P4-201ENST00000441256 376 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.06□□□□□ -1.6
ATP2A2P16615 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.06□□□□□ -1.6
ATP2A2P16615 RPS20P32-201ENST00000456044 356 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.06□□□□□ -1.6
ATP2A2P16615 HMGB1P21-201ENST00000502313 581 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 AC021146.3-201ENST00000511911 260 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.06□□□□□ -1.6
ATP2A2P16615 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
ATP2A2P16615 RNU6-709P-201ENST00000517257 104 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATP2A2P16615 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.06□□□□□ -1.6
ATP2A2P16615 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.06□□□□□ -1.6
ATP2A2P16615 AC090615.1-201ENST00000577519 154 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 DUXAP4-201ENST00000603046 613 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.06□□□□□ -1.6
ATP2A2P16615 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.06□□□□□ -1.6
ATP2A2P16615 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.06□□□□□ -1.6
ATP2A2P16615 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.06□□□□□ -1.6
ATP2A2P16615 AC017104.4-201ENST00000636283 1592 ntBASIC5.06□□□□□ -1.6
ATP2A2P16615 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
ATP2A2P16615 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATP2A2P16615 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
ATP2A2P16615 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.05□□□□□ -1.6
ATP2A2P16615 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATP2A2P16615 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATP2A2P16615 LINC01109-201ENST00000603837 3081 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 GNG5P1-201ENST00000255500 204 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 FRG1BP-201ENST00000278882 761 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 Y_RNA.46-201ENST00000362695 102 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 U8.3-201ENST00000363321 132 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 RNU6-1283P-201ENST00000365314 105 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 RPS3AP36-201ENST00000398190 775 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 AL356421.1-201ENST00000403255 413 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.05□□□□□ -1.6
ATP2A2P16615 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.05□□□□□ -1.6
ATP2A2P16615 EIF4HP2-201ENST00000424380 563 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 PSMA6P3-201ENST00000428242 164 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.05□□□□□ -1.6
ATP2A2P16615 OR4C10P-201ENST00000434991 931 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 MTATP6P23-201ENST00000440153 476 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 MTATP6P30-201ENST00000443540 664 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATP2A2P16615 PHBP16-201ENST00000446318 950 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.05□□□□□ -1.6
ATP2A2P16615 AP1S2P1-201ENST00000457344 379 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 AC105137.1-201ENST00000484355 562 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 MTND1P3-201ENST00000484956 952 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATP2A2P16615 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.05□□□□□ -1.6
ATP2A2P16615 AC010493.1-201ENST00000513479 292 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 AC093853.1-201ENST00000515689 483 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 RNU6-718P-201ENST00000516166 105 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 Y_RNA.672-201ENST00000516289 104 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 IGLVIV-53-201ENST00000520107 367 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.05□□□□□ -1.6
ATP2A2P16615 AP003122.4-201ENST00000530980 758 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.05□□□□□ -1.6
ATP2A2P16615 CENPUP2-201ENST00000555897 1186 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 AC093249.4-201ENST00000564755 259 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 SNORA59B-202ENST00000578183 701 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 HMGN1P30-201ENST00000589286 268 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.05□□□□□ -1.6
ATP2A2P16615 AC245014.2-201ENST00000603689 287 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 AC246785.4-201ENST00000605374 287 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 AL023881.1-201ENST00000621088 301 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 RNA5SP196-201ENST00000625967 102 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.05□□□□□ -1.6
ATP2A2P16615 AC010149.2-201ENST00000637608 315 ntBASIC5.05□□□□□ -1.6
ATP2A2P16615 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATP2A2P16615 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.05□□□□□ -1.6
ATP2A2P16615 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATP2A2P16615 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms