Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 MIR4278-201ENST00000636094 69 ntBASIC3.2□□□□□ -1.9
BCKDHAP12694 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BCKDHAP12694 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BCKDHAP12694 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
BCKDHAP12694 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BCKDHAP12694 EXOC5P1-201ENST00000510543 1969 ntBASIC3.2□□□□□ -1.9
BCKDHAP12694 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.19□□□□□ -1.9
BCKDHAP12694 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BCKDHAP12694 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
BCKDHAP12694 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
BCKDHAP12694 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
BCKDHAP12694 RNU4-35P-201ENST00000362588 141 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BCKDHAP12694 RNU6-821P-201ENST00000390995 107 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 SNRPEP2-201ENST00000397592 279 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.19□□□□□ -1.9
BCKDHAP12694 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.19□□□□□ -1.9
BCKDHAP12694 RAB9AP3-201ENST00000412737 573 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 LUZP4P1-201ENST00000415420 344 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 AC007435.1-201ENST00000421086 415 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 AC012065.2-201ENST00000421295 375 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BCKDHAP12694 BX890604.2-201ENST00000427883 474 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 AC073063.1-201ENST00000434352 607 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 GTF2IP7-202ENST00000436677 309 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 HMGB3P6-201ENST00000444896 598 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 AL034418.1-201ENST00000448675 860 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.19□□□□□ -1.9
BCKDHAP12694 RAB9AP1-201ENST00000449393 573 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 SNORA84-201ENST00000459229 133 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 snoU109.3-201ENST00000459477 145 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.19□□□□□ -1.9
BCKDHAP12694 AC104164.3-201ENST00000467363 1258 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 AC106707.2-201ENST00000484182 374 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 AP001086.1-201ENST00000494882 321 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.19□□□□□ -1.9
BCKDHAP12694 AC010460.2-201ENST00000509054 677 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 FCF1P8-201ENST00000510322 597 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.19□□□□□ -1.9
BCKDHAP12694 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.19□□□□□ -1.9
BCKDHAP12694 SNORA64.4-201ENST00000516632 81 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 AC087808.1-201ENST00000520501 361 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BCKDHAP12694 MTCYBP23-201ENST00000558717 1102 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.19□□□□□ -1.9
BCKDHAP12694 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.19□□□□□ -1.9
BCKDHAP12694 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.19□□□□□ -1.9
BCKDHAP12694 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.19□□□□□ -1.9
BCKDHAP12694 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BCKDHAP12694 XIAPP1-201ENST00000603162 600 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 AL133445.2-201ENST00000611191 527 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 SNORD39.4-201ENST00000620099 78 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 AL356321.1-201ENST00000621360 228 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.19□□□□□ -1.9
BCKDHAP12694 MKKS-204ENST00000639674 192 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 AC066616.2-201ENST00000559334 1481 ntBASIC3.19□□□□□ -1.9
BCKDHAP12694 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
BCKDHAP12694 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
BCKDHAP12694 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.18□□□□□ -1.9
BCKDHAP12694 Y_RNA.25-201ENST00000362528 102 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 SNORD56.3-201ENST00000363507 71 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 RNU4-51P-201ENST00000364206 140 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
BCKDHAP12694 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.18□□□□□ -1.9
BCKDHAP12694 SNORA40.2-201ENST00000390847 128 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 ARF4P3-201ENST00000397387 509 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 RPL31P1-201ENST00000398116 372 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 RNU2-37P-201ENST00000410695 177 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 Z75741.2-201ENST00000417272 1167 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 AC245291.1-201ENST00000419501 328 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 MRPS36P1-201ENST00000421291 307 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 RPL21P66-201ENST00000426566 466 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 HSFY7P-201ENST00000432672 318 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 HSFY8P-201ENST00000437934 318 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.18□□□□□ -1.9
BCKDHAP12694 Z95327.1-201ENST00000446082 482 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 EXOSC3P1-201ENST00000448649 500 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 HSFY5P-201ENST00000453726 309 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 PNPLA4P1-201ENST00000458328 305 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 RPL7P15-201ENST00000461190 712 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 AC108734.3-201ENST00000481241 1165 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 RPL31P13-201ENST00000484151 370 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
BCKDHAP12694 SNORA31.20-201ENST00000517111 133 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 SCARNA20.6-201ENST00000517251 106 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 PAICSP4-201ENST00000517543 1253 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 AP001207.2-201ENST00000519490 539 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.18□□□□□ -1.9
BCKDHAP12694 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
BCKDHAP12694 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.18□□□□□ -1.9
BCKDHAP12694 AC126177.3-201ENST00000551839 688 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.18□□□□□ -1.9
BCKDHAP12694 AC015917.1-201ENST00000579654 510 ntBASIC3.18□□□□□ -1.9
BCKDHAP12694 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.18□□□□□ -1.9
BCKDHAP12694 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms