Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SNORA59B-202ENST00000578183 701 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC012417.1-201ENST00000582307 1039 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AP000860.1-201ENST00000605250 559 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 CR392039.4-201ENST00000624968 501 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC026634.1-201ENST00000634369 198 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 CRYM-AS1-204ENST00000637983 556 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 AC087190.4-201ENST00000574616 8334 ntBASIC4.8□□□□□ -1.64
HLA-DOAP06340 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOAP06340 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOAP06340 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOAP06340 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOAP06340 AC017104.4-201ENST00000636283 1592 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOAP06340 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOAP06340 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOAP06340 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOAP06340 RNU6-216P-201ENST00000363282 104 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 SNORA62.3-201ENST00000365110 153 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 RNU5A-6P-201ENST00000384136 116 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOAP06340 PRELID3BP11-201ENST00000414230 479 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 REREP1Y-201ENST00000422655 198 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 AL953862.1-201ENST00000423016 168 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 REREP2Y-201ENST00000439103 200 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 SEPT7P3-201ENST00000455017 621 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 AL359385.1-201ENST00000456509 365 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 RPL21P6-201ENST00000479171 504 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 AC013828.1-201ENST00000481845 158 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 DEFB109F-201ENST00000491870 277 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 SLC25A15P5-201ENST00000508033 253 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOAP06340 AC074344.1-201ENST00000512823 224 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 AC022483.1-201ENST00000514020 567 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 AC091516.1-201ENST00000549191 703 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 AC090502.2-201ENST00000549267 280 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 ZNF519P2-201ENST00000557032 169 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 AL356055.1-201ENST00000602528 446 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 AC091965.4-201ENST00000607691 587 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 TUG1_1.1-201ENST00000610654 145 ntBASIC4.79□□□□□ -1.64
HLA-DOAP06340 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOAP06340 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DOAP06340 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOAP06340 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DOAP06340 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DOAP06340 RNU6-777P-201ENST00000364265 104 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 RNU6-1122P-201ENST00000384449 107 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 RNU6-780P-201ENST00000391030 104 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DOAP06340 MIR1277-201ENST00000408536 78 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 RNU6ATAC-201ENST00000408749 126 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 MTATP6P27-201ENST00000416987 621 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 USP9YP13-201ENST00000417797 480 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AC007742.1-201ENST00000425789 329 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 RPL37P1-201ENST00000432310 284 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AC007389.2-201ENST00000434630 306 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 ELOCP26-201ENST00000436067 329 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 YWHAZP8-201ENST00000436935 731 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 TRGVB-201ENST00000453257 471 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 RNU6-1218P-201ENST00000458990 108 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AC091564.1-201ENST00000464563 479 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 RPL31P58-201ENST00000469001 379 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 RPL23AP2-201ENST00000471227 466 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AC114981.1-201ENST00000503897 678 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 NDUFB4P2-201ENST00000509515 391 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 RNU6-583P-201ENST00000516012 92 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms