Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RPS4XP10-201ENST00000465034 731 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SEMA3DO95025 RPS27P23-201ENST00000487608 251 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
SEMA3DO95025 OR8K2P-201ENST00000524645 927 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 AP004371.1-201ENST00000525240 214 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.97□□□□□ -1.93
SEMA3DO95025 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.97□□□□□ -1.93
SEMA3DO95025 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.97□□□□□ -1.93
SEMA3DO95025 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.97□□□□□ -1.93
SEMA3DO95025 AC079148.1-201ENST00000565944 819 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 MIR5680-201ENST00000577577 84 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 MIR4429-201ENST00000580105 73 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.97□□□□□ -1.93
SEMA3DO95025 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.97□□□□□ -1.93
SEMA3DO95025 AL606834.2-201ENST00000602954 668 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.97□□□□□ -1.93
SEMA3DO95025 AC012314.7-201ENST00000619693 93 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.97□□□□□ -1.93
SEMA3DO95025 AC132825.7-201ENST00000638744 335 ntBASIC2.97□□□□□ -1.93
SEMA3DO95025 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.97□□□□□ -1.93
SEMA3DO95025 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SEMA3DO95025 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SEMA3DO95025 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SEMA3DO95025 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.97□□□□□ -1.93
SEMA3DO95025 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.96□□□□□ -1.93
SEMA3DO95025 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.96□□□□□ -1.93
SEMA3DO95025 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SEMA3DO95025 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.96□□□□□ -1.94
SEMA3DO95025 MIR16-2-201ENST00000362117 81 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 RNU6-1243P-201ENST00000364028 107 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 SNORA51.12-201ENST00000384448 134 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 SNORD15B-201ENST00000384714 146 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 MIR887-201ENST00000401258 79 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 ATP5F1P6-201ENST00000402768 767 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 RN7SKP27-201ENST00000410684 333 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 AC008173.1-201ENST00000418901 264 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 PAICSP7-201ENST00000419829 962 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 AL139281.1-201ENST00000422120 335 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 AL353678.1-201ENST00000422735 741 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.96□□□□□ -1.94
SEMA3DO95025 YME1L1P1-201ENST00000429435 297 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.96□□□□□ -1.94
SEMA3DO95025 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SEMA3DO95025 RPL21P2-201ENST00000440049 481 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 AL591503.2-201ENST00000442314 1005 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.96□□□□□ -1.94
SEMA3DO95025 AC005002.1-201ENST00000447458 540 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 Z99714.1-201ENST00000450463 807 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 UQCRHP3-201ENST00000451503 251 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 AL590639.1-201ENST00000456484 337 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.96□□□□□ -1.94
SEMA3DO95025 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.96□□□□□ -1.94
SEMA3DO95025 AC104472.2-201ENST00000469035 601 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SEMA3DO95025 RPL21P47-201ENST00000483696 477 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 KLHL2P1-201ENST00000508691 521 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.96□□□□□ -1.94
SEMA3DO95025 AP001029.3-201ENST00000588063 596 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 BNIP3P4-201ENST00000604946 565 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 AL627309.6-201ENST00000606857 840 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 AC100793.4-201ENST00000613683 429 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 VN1R9P-201ENST00000614184 867 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.96□□□□□ -1.94
SEMA3DO95025 AC084757.4-201ENST00000616350 526 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.96□□□□□ -1.94
SEMA3DO95025 AC099506.2-201ENST00000623074 221 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 AC097460.3-201ENST00000623099 442 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 AC018692.3-201ENST00000623929 123 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SEMA3DO95025 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.96□□□□□ -1.94
SEMA3DO95025 AC009487.2-201ENST00000420969 6821 ntBASIC2.96□□□□□ -1.94
SEMA3DO95025 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SEMA3DO95025 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.95□□□□□ -1.94
SEMA3DO95025 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.95□□□□□ -1.94
SEMA3DO95025 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SEMA3DO95025 AC108206.1-201ENST00000570186 4159 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 MIR670-201ENST00000390142 98 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 AC110754.1-201ENST00000399740 601 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 AL121972.1-201ENST00000402023 252 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 PTGES3P2-201ENST00000407942 482 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 RNA5SP120-201ENST00000410900 112 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 RPS3AP25-201ENST00000411660 793 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 AC245054.2-201ENST00000415639 319 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.95□□□□□ -1.94
SEMA3DO95025 AC233728.2-201ENST00000425348 757 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.95□□□□□ -1.94
SEMA3DO95025 SNRPEP4-201ENST00000435815 279 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.95□□□□□ -1.94
SEMA3DO95025 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.95□□□□□ -1.94
SEMA3DO95025 AC092170.1-201ENST00000440211 356 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 AC044797.1-201ENST00000445744 679 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 AC016696.1-201ENST00000446949 318 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SEMA3DO95025 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.95□□□□□ -1.94
SEMA3DO95025 PRSS3P4-201ENST00000453323 162 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 AL445669.2-201ENST00000454425 421 ntBASIC2.95□□□□□ -1.94
SEMA3DO95025 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.95□□□□□ -1.94
SEMA3DO95025 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.95□□□□□ -1.94
SEMA3DO95025 RN7SL807P-201ENST00000470923 297 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms