Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RNF40O75150 HSPA8P1-201ENST00000425843 1833 ntBASIC6.64□□□□□ -1.35
RNF40O75150 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF40O75150 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RNF40O75150 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF40O75150 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF40O75150 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF40O75150 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF40O75150 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF40O75150 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RNF40O75150 Y_RNA.199-201ENST00000364014 102 ntBASIC6.64□□□□□ -1.35
RNF40O75150 RNU6-1078P-201ENST00000364522 103 ntBASIC6.64□□□□□ -1.35
RNF40O75150 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF40O75150 RNU6-1117P-201ENST00000384525 104 ntBASIC6.64□□□□□ -1.35
RNF40O75150 MIR625-201ENST00000385047 85 ntBASIC6.64□□□□□ -1.35
RNF40O75150 RNA5SP178-201ENST00000410380 128 ntBASIC6.64□□□□□ -1.35
RNF40O75150 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RNF40O75150 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.64□□□□□ -1.35
RNF40O75150 RPS12P5-201ENST00000423449 371 ntBASIC6.64□□□□□ -1.35
RNF40O75150 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC6.64□□□□□ -1.35
RNF40O75150 RPS29P14-201ENST00000431518 171 ntBASIC6.64□□□□□ -1.35
RNF40O75150 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF40O75150 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF40O75150 AL353691.1-201ENST00000451332 387 ntBASIC6.64□□□□□ -1.35
RNF40O75150 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RNF40O75150 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.64□□□□□ -1.35
RNF40O75150 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.64□□□□□ -1.35
RNF40O75150 AC023968.1-201ENST00000560719 475 ntBASIC6.64□□□□□ -1.35
RNF40O75150 AC009852.2-201ENST00000567898 485 ntBASIC6.64□□□□□ -1.35
RNF40O75150 AP001485.1-201ENST00000604799 199 ntBASIC6.64□□□□□ -1.35
RNF40O75150 AL161616.1-201ENST00000611867 286 ntBASIC6.64□□□□□ -1.35
RNF40O75150 AL590099.1-201ENST00000615276 138 ntBASIC6.64□□□□□ -1.35
RNF40O75150 AL132640.3-201ENST00000630473 177 ntBASIC6.64□□□□□ -1.35
RNF40O75150 LINC02495-203ENST00000636704 242 ntBASIC6.64□□□□□ -1.35
RNF40O75150 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF40O75150 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF40O75150 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF40O75150 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF40O75150 AC023245.2-201ENST00000530760 2978 ntBASIC6.63□□□□□ -1.35
RNF40O75150 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.63□□□□□ -1.35
RNF40O75150 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.63□□□□□ -1.35
RNF40O75150 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF40O75150 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF40O75150 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF40O75150 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
RNF40O75150 RNU6-1317P-201ENST00000364582 104 ntBASIC6.63□□□□□ -1.35
RNF40O75150 RNU6-946P-201ENST00000383878 107 ntBASIC6.63□□□□□ -1.35
RNF40O75150 AC005522.1-201ENST00000395416 346 ntBASIC6.63□□□□□ -1.35
RNF40O75150 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF40O75150 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF40O75150 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.63□□□□□ -1.35
RNF40O75150 RPL12P16-201ENST00000431098 498 ntBASIC6.63□□□□□ -1.35
RNF40O75150 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF40O75150 PPIAP13-201ENST00000434706 478 ntBASIC6.63□□□□□ -1.35
RNF40O75150 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF40O75150 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF40O75150 SNRPCP3-201ENST00000474888 476 ntBASIC6.63□□□□□ -1.35
RNF40O75150 RPS27AP1-201ENST00000475545 471 ntBASIC6.63□□□□□ -1.35
RNF40O75150 AP000797.2-201ENST00000475768 606 ntBASIC6.63□□□□□ -1.35
RNF40O75150 AL035690.1-201ENST00000490892 383 ntBASIC6.63□□□□□ -1.35
RNF40O75150 AP002453.1-201ENST00000492327 668 ntBASIC6.63□□□□□ -1.35
RNF40O75150 AKIRIN2P1-201ENST00000505898 352 ntBASIC6.63□□□□□ -1.35
RNF40O75150 AC008958.1-201ENST00000511047 682 ntBASIC6.63□□□□□ -1.35
RNF40O75150 RNU6-1338P-201ENST00000516328 91 ntBASIC6.63□□□□□ -1.35
RNF40O75150 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF40O75150 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.63□□□□□ -1.35
RNF40O75150 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
RNF40O75150 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF40O75150 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF40O75150 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF40O75150 AC011978.2-201ENST00000569835 2054 ntBASIC6.63□□□□□ -1.35
RNF40O75150 AC005183.1-201ENST00000603687 1979 ntBASIC6.63□□□□□ -1.35
RNF40O75150 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.63□□□□□ -1.35
RNF40O75150 AC243654.2-201ENST00000612843 443 ntBASIC6.63□□□□□ -1.35
RNF40O75150 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
RNF40O75150 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
RNF40O75150 MRPL57P1-201ENST00000621486 265 ntBASIC6.63□□□□□ -1.35
RNF40O75150 AL391684.1-202ENST00000641293 1636 ntBASIC6.63□□□□□ -1.35
RNF40O75150 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
RNF40O75150 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
RNF40O75150 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF40O75150 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF40O75150 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
RNF40O75150 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF40O75150 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
RNF40O75150 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.62□□□□□ -1.35
RNF40O75150 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
RNF40O75150 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF40O75150 ZNF285B-201ENST00000561698 1767 ntBASIC6.62□□□□□ -1.35
RNF40O75150 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.62□□□□□ -1.35
RNF40O75150 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
RNF40O75150 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF40O75150 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
RNF40O75150 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF40O75150 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF40O75150 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF40O75150 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
RNF40O75150 Y_RNA.48-201ENST00000362710 103 ntBASIC6.62□□□□□ -1.35
RNF40O75150 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RNF40O75150 AC015977.1-201ENST00000418887 292 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms