Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.98□□□□□ -1.93
SHOX2O60902 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.98□□□□□ -1.93
SHOX2O60902 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SHOX2O60902 AC009464.1-201ENST00000615731 469 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 AC079228.1-201ENST00000624774 1049 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.98□□□□□ -1.93
SHOX2O60902 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.98□□□□□ -1.93
SHOX2O60902 ZNF37BP-203ENST00000452306 1352 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 AP001350.1-201ENST00000601906 1524 ntBASIC2.98□□□□□ -1.93
SHOX2O60902 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHOX2O60902 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHOX2O60902 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.97□□□□□ -1.93
SHOX2O60902 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.97□□□□□ -1.93
SHOX2O60902 OR1S2-201ENST00000302592 978 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 RNU6-1243P-201ENST00000364028 107 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
SHOX2O60902 MIR490-201ENST00000384865 128 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 AL121972.1-201ENST00000402023 252 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 HMGN1P24-201ENST00000412282 298 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 RAD23BP2-201ENST00000416003 1207 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.97□□□□□ -1.93
SHOX2O60902 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.97□□□□□ -1.93
SHOX2O60902 TPTE2P1-204ENST00000435256 593 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 AC027673.1-201ENST00000456245 405 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.97□□□□□ -1.93
SHOX2O60902 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.97□□□□□ -1.93
SHOX2O60902 MTCO3P35-201ENST00000485582 781 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.97□□□□□ -1.93
SHOX2O60902 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.97□□□□□ -1.93
SHOX2O60902 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.97□□□□□ -1.93
SHOX2O60902 AC008885.2-201ENST00000509506 930 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 OR8I1P-201ENST00000529291 931 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 AC007458.1-201ENST00000542812 373 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHOX2O60902 AC005242.1-201ENST00000585658 438 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 AL133393.1-201ENST00000603277 287 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 AC013412.1-201ENST00000610687 192 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.97□□□□□ -1.93
SHOX2O60902 AL162274.2-201ENST00000614406 332 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHOX2O60902 U6.107-201ENST00000637108 79 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 Z83843.1-201ENST00000604070 3685 ntBASIC2.97□□□□□ -1.93
SHOX2O60902 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHOX2O60902 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHOX2O60902 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SHOX2O60902 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHOX2O60902 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHOX2O60902 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.96□□□□□ -1.94
SHOX2O60902 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.96□□□□□ -1.94
SHOX2O60902 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHOX2O60902 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHOX2O60902 RNU6-1181P-201ENST00000384191 106 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHOX2O60902 SFR1P1-201ENST00000403720 688 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.96□□□□□ -1.94
SHOX2O60902 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.96□□□□□ -1.94
SHOX2O60902 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.96□□□□□ -1.94
SHOX2O60902 RPL21P66-201ENST00000426566 466 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.96□□□□□ -1.94
SHOX2O60902 AL513175.1-201ENST00000431492 780 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 AC092641.1-201ENST00000440229 772 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 RPS26P56-201ENST00000444468 240 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.96□□□□□ -1.94
SHOX2O60902 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.96□□□□□ -1.94
SHOX2O60902 SYPL1P1-201ENST00000473622 768 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 RN7SL293P-201ENST00000481765 281 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.96□□□□□ -1.94
SHOX2O60902 TBCAP3-201ENST00000512475 312 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 HMGN1P15-201ENST00000513870 295 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 MTCO2P32-201ENST00000514865 403 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 MTND5P4-201ENST00000514978 288 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 OR5AK3P-201ENST00000527486 1297 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.96□□□□□ -1.94
SHOX2O60902 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.96□□□□□ -1.94
SHOX2O60902 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.96□□□□□ -1.94
SHOX2O60902 MTCYBP28-201ENST00000566728 1132 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.96□□□□□ -1.94
SHOX2O60902 AC012182.1-201ENST00000570133 895 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 MIR5186-201ENST00000577504 120 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.96□□□□□ -1.94
SHOX2O60902 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.96□□□□□ -1.94
SHOX2O60902 AL356575.1-201ENST00000603008 283 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 AL160237.3-201ENST00000604114 1013 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 AL009028.1-201ENST00000604895 802 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.96□□□□□ -1.94
SHOX2O60902 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.96□□□□□ -1.94
SHOX2O60902 AC004696.1-201ENST00000614345 607 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 AC105227.2-201ENST00000615075 605 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 CR381653.2-201ENST00000624041 768 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.96□□□□□ -1.94
SHOX2O60902 AC244258.1-201ENST00000637553 1071 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 AC002546.1-201ENST00000588041 2504 ntBASIC2.96□□□□□ -1.94
SHOX2O60902 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
SHOX2O60902 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SHOX2O60902 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SHOX2O60902 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
SHOX2O60902 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SHOX2O60902 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms