Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RN7SKP283-201ENST00000517197 270 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 AP005660.1-201ENST00000522972 293 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 AL133153.1-201ENST00000557756 303 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 RPL23AP84-201ENST00000571193 464 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 MIR5692C2-201ENST00000577959 77 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 CPDP1-201ENST00000579660 283 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.02□□□□□ -1.45
GFRA3O60609 RN7SL544P-201ENST00000617232 284 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 RN7SL763P-201ENST00000620922 284 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 MRPL57P1-201ENST00000621486 265 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.02□□□□□ -1.45
GFRA3O60609 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 AC138915.4-201ENST00000565549 4147 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.02□□□□□ -1.45
GFRA3O60609 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.02□□□□□ -1.45
GFRA3O60609 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.02□□□□□ -1.45
GFRA3O60609 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 ZNF299P-201ENST00000406845 1804 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
GFRA3O60609 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
GFRA3O60609 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
GFRA3O60609 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
GFRA3O60609 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
GFRA3O60609 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.01□□□□□ -1.45
GFRA3O60609 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
GFRA3O60609 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
GFRA3O60609 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.01□□□□□ -1.45
GFRA3O60609 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
GFRA3O60609 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
GFRA3O60609 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
GFRA3O60609 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
GFRA3O60609 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
GFRA3O60609 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
GFRA3O60609 RNU6-97P-201ENST00000363387 104 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 U8.4-201ENST00000363626 134 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 Y_RNA.262-201ENST00000364641 102 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 RNU6-239P-201ENST00000390990 99 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 Y_RNA.623-201ENST00000411128 95 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 AC006946.1-201ENST00000429106 328 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.01□□□□□ -1.45
GFRA3O60609 AL591043.1-201ENST00000432461 424 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 AC010881.1-201ENST00000433830 235 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.01□□□□□ -1.45
GFRA3O60609 CBX1P4-201ENST00000439415 457 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 RPL23AP58-201ENST00000440453 469 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.01□□□□□ -1.45
GFRA3O60609 NOP56P2-201ENST00000447491 769 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 RN7SL385P-201ENST00000468873 276 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 RN7SL738P-201ENST00000470264 297 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 HMGN2P13-201ENST00000476476 274 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.01□□□□□ -1.45
GFRA3O60609 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC6.01□□□□□ -1.45
GFRA3O60609 IGKV2D-10-201ENST00000520194 281 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 AC133555.2-201ENST00000550213 292 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.01□□□□□ -1.45
GFRA3O60609 AC096996.1-201ENST00000563813 325 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC6.01□□□□□ -1.45
GFRA3O60609 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.01□□□□□ -1.45
GFRA3O60609 MIR4480-201ENST00000582492 71 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 AC037487.3-201ENST00000606668 112 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.01□□□□□ -1.45
GFRA3O60609 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.01□□□□□ -1.45
GFRA3O60609 MIR8080-201ENST00000622224 89 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 AC008785.1-201ENST00000624475 456 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
GFRA3O60609 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
GFRA3O60609 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
GFRA3O60609 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.01□□□□□ -1.45
GFRA3O60609 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.01□□□□□ -1.45
GFRA3O60609 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
GFRA3O60609 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
GFRA3O60609 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.45
GFRA3O60609 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.01□□□□□ -1.45
GFRA3O60609 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
GFRA3O60609 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
GFRA3O60609 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
GFRA3O60609 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.01□□□□□ -1.45
GFRA3O60609 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
GFRA3O60609 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA3O60609 AC010168.2-201ENST00000562691 5428 ntBASIC6□□□□□ -1.45
GFRA3O60609 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
GFRA3O60609 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
GFRA3O60609 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
GFRA3O60609 RNU6-653P-201ENST00000363074 106 ntBASIC6□□□□□ -1.45
GFRA3O60609 RNU6-294P-201ENST00000364999 102 ntBASIC6□□□□□ -1.45
GFRA3O60609 RNU4-11P-201ENST00000365287 132 ntBASIC6□□□□□ -1.45
GFRA3O60609 Y_RNA.420-201ENST00000384043 110 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms