Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 Y_RNA.618-201ENST00000410949 107 ntBASIC5.59□□□□□ -1.51
SOX1O00570 AC068533.1-201ENST00000418542 415 ntBASIC5.59□□□□□ -1.51
SOX1O00570 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.59□□□□□ -1.51
SOX1O00570 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.59□□□□□ -1.51
SOX1O00570 MRPS21P3-201ENST00000436696 262 ntBASIC5.59□□□□□ -1.51
SOX1O00570 FABP5P14-201ENST00000437273 393 ntBASIC5.59□□□□□ -1.51
SOX1O00570 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.59□□□□□ -1.51
SOX1O00570 HMGB3P11-201ENST00000440127 604 ntBASIC5.59□□□□□ -1.51
SOX1O00570 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.59□□□□□ -1.51
SOX1O00570 MRPS31P2-201ENST00000451581 518 ntBASIC5.59□□□□□ -1.51
SOX1O00570 MTND1P9-201ENST00000453775 944 ntBASIC5.59□□□□□ -1.51
SOX1O00570 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.59□□□□□ -1.51
SOX1O00570 SNRPFP3-201ENST00000457792 225 ntBASIC5.59□□□□□ -1.51
SOX1O00570 PLGLA-201ENST00000465668 449 ntBASIC5.59□□□□□ -1.51
SOX1O00570 AC087879.1-201ENST00000474343 374 ntBASIC5.59□□□□□ -1.51
SOX1O00570 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.59□□□□□ -1.51
SOX1O00570 RNU6-273P-201ENST00000516937 96 ntBASIC5.59□□□□□ -1.51
SOX1O00570 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.59□□□□□ -1.51
SOX1O00570 MTND4P7-201ENST00000523876 130 ntBASIC5.59□□□□□ -1.51
SOX1O00570 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.59□□□□□ -1.51
SOX1O00570 OR4P1P-201ENST00000530808 1136 ntBASIC5.59□□□□□ -1.51
SOX1O00570 AP001781.1-201ENST00000530977 207 ntBASIC5.59□□□□□ -1.51
SOX1O00570 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.59□□□□□ -1.51
SOX1O00570 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.59□□□□□ -1.51
SOX1O00570 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.59□□□□□ -1.51
SOX1O00570 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.59□□□□□ -1.51
SOX1O00570 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
SOX1O00570 AC006130.2-201ENST00000586202 326 ntBASIC5.59□□□□□ -1.51
SOX1O00570 AC024220.1-201ENST00000603675 484 ntBASIC5.59□□□□□ -1.51
SOX1O00570 AC092807.2-201ENST00000609367 243 ntBASIC5.59□□□□□ -1.51
SOX1O00570 ZYXP1-201ENST00000617638 118 ntBASIC5.59□□□□□ -1.51
SOX1O00570 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 AC114774.1-201ENST00000507410 1770 ntBASIC5.59□□□□□ -1.51
SOX1O00570 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
SOX1O00570 AC016745.2-201ENST00000608834 3443 ntBASIC5.59□□□□□ -1.51
SOX1O00570 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SOX1O00570 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
SOX1O00570 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
SOX1O00570 AC068870.1-201ENST00000563737 2455 ntBASIC5.58□□□□□ -1.52
SOX1O00570 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
SOX1O00570 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SOX1O00570 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX1O00570 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX1O00570 AC121333.1-201ENST00000567488 2709 ntBASIC5.58□□□□□ -1.52
SOX1O00570 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX1O00570 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.58□□□□□ -1.52
SOX1O00570 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SOX1O00570 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SOX1O00570 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SOX1O00570 RNA5SP326-201ENST00000363209 110 ntBASIC5.58□□□□□ -1.52
SOX1O00570 SNORD113-7-201ENST00000363762 77 ntBASIC5.58□□□□□ -1.52
SOX1O00570 RNU6-1188P-201ENST00000363795 107 ntBASIC5.58□□□□□ -1.52
SOX1O00570 Y_RNA.193-201ENST00000363979 102 ntBASIC5.58□□□□□ -1.52
SOX1O00570 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX1O00570 RNU6-1029P-201ENST00000384109 107 ntBASIC5.58□□□□□ -1.52
SOX1O00570 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SOX1O00570 AL445189.1-201ENST00000405722 338 ntBASIC5.58□□□□□ -1.52
SOX1O00570 RN7SKP114-201ENST00000410327 279 ntBASIC5.58□□□□□ -1.52
SOX1O00570 RN7SKP247-201ENST00000411094 308 ntBASIC5.58□□□□□ -1.52
SOX1O00570 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX1O00570 MTCYBP10-201ENST00000424905 650 ntBASIC5.58□□□□□ -1.52
SOX1O00570 PSMA6P3-201ENST00000428242 164 ntBASIC5.58□□□□□ -1.52
SOX1O00570 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.58□□□□□ -1.52
SOX1O00570 AL731563.1-201ENST00000442202 214 ntBASIC5.58□□□□□ -1.52
SOX1O00570 AL358232.1-201ENST00000448030 501 ntBASIC5.58□□□□□ -1.52
SOX1O00570 AL118520.1-201ENST00000450770 291 ntBASIC5.58□□□□□ -1.52
SOX1O00570 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX1O00570 AC106872.2-201ENST00000494303 480 ntBASIC5.58□□□□□ -1.52
SOX1O00570 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX1O00570 AC093767.1-201ENST00000504523 156 ntBASIC5.58□□□□□ -1.52
SOX1O00570 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.58□□□□□ -1.52
SOX1O00570 AC104057.1-201ENST00000515547 497 ntBASIC5.58□□□□□ -1.52
SOX1O00570 AC093853.1-201ENST00000515689 483 ntBASIC5.58□□□□□ -1.52
SOX1O00570 RNU2-10P-201ENST00000516375 211 ntBASIC5.58□□□□□ -1.52
SOX1O00570 RNA5SP43-201ENST00000516559 110 ntBASIC5.58□□□□□ -1.52
SOX1O00570 RNA5SP503-201ENST00000517047 117 ntBASIC5.58□□□□□ -1.52
SOX1O00570 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX1O00570 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX1O00570 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX1O00570 AP000857.1-201ENST00000532151 543 ntBASIC5.58□□□□□ -1.52
SOX1O00570 AP001880.2-201ENST00000538233 448 ntBASIC5.58□□□□□ -1.52
SOX1O00570 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.58□□□□□ -1.52
SOX1O00570 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX1O00570 IMMP1LP2-201ENST00000552954 492 ntBASIC5.58□□□□□ -1.52
SOX1O00570 AL118558.2-201ENST00000556294 238 ntBASIC5.58□□□□□ -1.52
SOX1O00570 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX1O00570 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.58□□□□□ -1.52
SOX1O00570 MIR4790-201ENST00000577799 79 ntBASIC5.58□□□□□ -1.52
SOX1O00570 MIR3158-1-201ENST00000583596 81 ntBASIC5.58□□□□□ -1.52
SOX1O00570 AP000769.2-201ENST00000602344 396 ntBASIC5.58□□□□□ -1.52
SOX1O00570 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.58□□□□□ -1.52
SOX1O00570 uc_338.34-201ENST00000617467 174 ntBASIC5.58□□□□□ -1.52
SOX1O00570 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
SOX1O00570 U4.1-201ENST00000620349 87 ntBASIC5.58□□□□□ -1.52
SOX1O00570 AC022418.1-201ENST00000624118 445 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms