Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.89□□□□□ -1.63
CBX4O00257 AC093249.4-201ENST00000564755 259 ntBASIC4.89□□□□□ -1.63
CBX4O00257 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.89□□□□□ -1.63
CBX4O00257 MIR5699-201ENST00000578903 90 ntBASIC4.89□□□□□ -1.63
CBX4O00257 AP003117.2-201ENST00000606010 545 ntBASIC4.89□□□□□ -1.63
CBX4O00257 MIR6853-201ENST00000619642 74 ntBASIC4.89□□□□□ -1.63
CBX4O00257 AC002550.2-201ENST00000621246 394 ntBASIC4.89□□□□□ -1.63
CBX4O00257 AP000843.1-201ENST00000624880 701 ntBASIC4.89□□□□□ -1.63
CBX4O00257 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.89□□□□□ -1.63
CBX4O00257 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.89□□□□□ -1.63
CBX4O00257 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.89□□□□□ -1.63
CBX4O00257 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CBX4O00257 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.89□□□□□ -1.63
CBX4O00257 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CBX4O00257 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CBX4O00257 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CBX4O00257 CR848007.1-201ENST00000442354 1699 ntBASIC4.89□□□□□ -1.63
CBX4O00257 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CBX4O00257 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CBX4O00257 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CBX4O00257 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CBX4O00257 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CBX4O00257 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CBX4O00257 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.88□□□□□ -1.63
CBX4O00257 AC026951.1-201ENST00000559530 2459 ntBASIC4.88□□□□□ -1.63
CBX4O00257 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CBX4O00257 AL442639.1-201ENST00000625030 1899 ntBASIC4.88□□□□□ -1.63
CBX4O00257 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CBX4O00257 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CBX4O00257 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CBX4O00257 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CBX4O00257 OR5J1P-201ENST00000313544 939 ntBASIC4.88□□□□□ -1.63
CBX4O00257 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CBX4O00257 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.88□□□□□ -1.63
CBX4O00257 AC068538.1-201ENST00000376856 336 ntBASIC4.88□□□□□ -1.63
CBX4O00257 Y_RNA.390-201ENST00000383932 102 ntBASIC4.88□□□□□ -1.63
CBX4O00257 RNU1-82P-201ENST00000390851 165 ntBASIC4.88□□□□□ -1.63
CBX4O00257 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.88□□□□□ -1.63
CBX4O00257 RSU1P3-201ENST00000412878 835 ntBASIC4.88□□□□□ -1.63
CBX4O00257 BX510359.2-201ENST00000417920 305 ntBASIC4.88□□□□□ -1.63
CBX4O00257 AC005154.2-201ENST00000438110 379 ntBASIC4.88□□□□□ -1.63
CBX4O00257 AC093156.1-201ENST00000440382 670 ntBASIC4.88□□□□□ -1.63
CBX4O00257 AL589765.3-201ENST00000446084 462 ntBASIC4.88□□□□□ -1.63
CBX4O00257 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.88□□□□□ -1.63
CBX4O00257 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.88□□□□□ -1.63
CBX4O00257 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CBX4O00257 AC111000.3-201ENST00000508057 576 ntBASIC4.88□□□□□ -1.63
CBX4O00257 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.88□□□□□ -1.63
CBX4O00257 ENPP7P9-201ENST00000514456 627 ntBASIC4.88□□□□□ -1.63
CBX4O00257 RNU1-6P-201ENST00000516290 144 ntBASIC4.88□□□□□ -1.63
CBX4O00257 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.88□□□□□ -1.63
CBX4O00257 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.88□□□□□ -1.63
CBX4O00257 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CBX4O00257 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.88□□□□□ -1.63
CBX4O00257 SETP7-201ENST00000552169 453 ntBASIC4.88□□□□□ -1.63
CBX4O00257 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CBX4O00257 AP005205.1-201ENST00000563503 508 ntBASIC4.88□□□□□ -1.63
CBX4O00257 MIR4458-201ENST00000578872 75 ntBASIC4.88□□□□□ -1.63
CBX4O00257 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.88□□□□□ -1.63
CBX4O00257 RPL12P25-202ENST00000598100 674 ntBASIC4.88□□□□□ -1.63
CBX4O00257 AC073091.2-201ENST00000603205 907 ntBASIC4.88□□□□□ -1.63
CBX4O00257 U73479.1-201ENST00000618062 168 ntBASIC4.88□□□□□ -1.63
CBX4O00257 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.88□□□□□ -1.63
CBX4O00257 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CBX4O00257 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.88□□□□□ -1.63
CBX4O00257 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.88□□□□□ -1.63
CBX4O00257 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CBX4O00257 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CBX4O00257 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.88□□□□□ -1.63
CBX4O00257 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CBX4O00257 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CBX4O00257 AC027287.1-201ENST00000553115 1453 ntBASIC4.88□□□□□ -1.63
CBX4O00257 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.88□□□□□ -1.63
CBX4O00257 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CBX4O00257 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.87□□□□□ -1.63
CBX4O00257 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CBX4O00257 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.87□□□□□ -1.63
CBX4O00257 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
CBX4O00257 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
CBX4O00257 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
CBX4O00257 RNU5A-8P-201ENST00000364102 114 ntBASIC4.87□□□□□ -1.63
CBX4O00257 RN7SKP224-201ENST00000364140 325 ntBASIC4.87□□□□□ -1.63
CBX4O00257 Y_RNA.295-201ENST00000364918 102 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AC019155.1-201ENST00000382242 574 ntBASIC4.87□□□□□ -1.63
CBX4O00257 RNU6-877P-201ENST00000383868 107 ntBASIC4.87□□□□□ -1.63
CBX4O00257 RPL7P60-201ENST00000397636 735 ntBASIC4.87□□□□□ -1.63
CBX4O00257 RAP1BP3-201ENST00000407180 549 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AL603766.1-201ENST00000407763 664 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.87□□□□□ -1.63
CBX4O00257 EIF4A1P3-201ENST00000411521 244 ntBASIC4.87□□□□□ -1.63
CBX4O00257 CCDC58P2-201ENST00000417131 366 ntBASIC4.87□□□□□ -1.63
CBX4O00257 HMGB3P20-201ENST00000417997 600 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AL139413.1-201ENST00000421309 217 ntBASIC4.87□□□□□ -1.63
CBX4O00257 RGS17P1-201ENST00000423358 553 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AC007283.2-201ENST00000424739 197 ntBASIC4.87□□□□□ -1.63
CBX4O00257 RPL18P10-201ENST00000425606 538 ntBASIC4.87□□□□□ -1.63
CBX4O00257 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.87□□□□□ -1.63
CBX4O00257 BTF3P10-201ENST00000433415 495 ntBASIC4.87□□□□□ -1.63
CBX4O00257 TIMM9P1-201ENST00000436122 256 ntBASIC4.87□□□□□ -1.63
CBX4O00257 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms