Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL365440.1-201ENST00000436135 2167 ntBASIC3.73□□□□□ -1.81
CCDC188H7C350 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC188H7C350 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC188H7C350 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC188H7C350 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC188H7C350 USP8P1-201ENST00000494673 3183 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC188H7C350 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CCDC188H7C350 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CCDC188H7C350 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CCDC188H7C350 RNU2-71P-201ENST00000411395 189 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC092447.6-201ENST00000414578 210 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 SSR1P2-201ENST00000415208 787 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC188H7C350 AL591419.1-201ENST00000427423 339 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 VDAC1P3-201ENST00000434069 851 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC084290.1-201ENST00000434995 374 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC188H7C350 Z95327.1-201ENST00000446082 482 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC005297.2-201ENST00000450430 606 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC188H7C350 USP9YP34-201ENST00000453983 808 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC188H7C350 USP9YP25-201ENST00000457708 443 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 RPS4XP10-201ENST00000465034 731 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC023598.1-201ENST00000472521 361 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC108729.1-201ENST00000487812 947 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC023424.2-201ENST00000493479 777 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 RN7SL323P-201ENST00000494712 295 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC188H7C350 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC188H7C350 FTH1P21-201ENST00000512179 511 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC188H7C350 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC188H7C350 SNORA70.19-201ENST00000516717 90 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 RNU6-352P-201ENST00000516908 107 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC104986.1-201ENST00000517978 436 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CCDC188H7C350 AC022861.1-201ENST00000522981 663 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC188H7C350 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC188H7C350 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC188H7C350 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC188H7C350 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC188H7C350 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC188H7C350 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC188H7C350 AC022662.1-201ENST00000580252 331 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 MIR3939-201ENST00000582614 106 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 KPNA2P3-201ENST00000584190 848 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC022146.1-201ENST00000595307 847 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC080013.4-201ENST00000607624 649 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC006023.2-201ENST00000609916 167 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC188H7C350 CRYM-AS1-204ENST00000637983 556 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC188H7C350 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC188H7C350 EXOC5P1-201ENST00000510543 1969 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC005539.1-201ENST00000443768 1479 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 AC066616.2-201ENST00000559334 1481 ntBASIC3.72□□□□□ -1.81
CCDC188H7C350 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC188H7C350 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
CCDC188H7C350 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC188H7C350 AL021368.2-201ENST00000606125 5352 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CCDC188H7C350 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC188H7C350 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC188H7C350 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC188H7C350 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC188H7C350 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCDC188H7C350 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC188H7C350 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC188H7C350 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC188H7C350 RNU6-1074P-201ENST00000383995 104 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 SNORD3H-201ENST00000384486 214 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 RNU2-37P-201ENST00000410695 177 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 AC093578.1-201ENST00000415219 368 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC188H7C350 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC188H7C350 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC188H7C350 MTND4LP10-201ENST00000435146 291 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC188H7C350 HSPE1P28-201ENST00000443139 211 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC188H7C350 MTND2P19-201ENST00000449129 1012 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC188H7C350 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC188H7C350 HMGB1P15-201ENST00000453854 435 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC188H7C350 RPL18AP17-201ENST00000455326 198 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 AC007967.1-201ENST00000455422 1159 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 snoU13.4-201ENST00000458916 104 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC188H7C350 AC079395.1-201ENST00000510981 262 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC188H7C350 FABP5P12-201ENST00000515543 389 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 RN7SKP21-201ENST00000516503 220 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC188H7C350 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC188H7C350 AC004024.1-201ENST00000549244 247 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms