Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 UBE2WP1-201ENST00000362030 340 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 RNU6-834P-201ENST00000362367 110 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 Y_RNA.324-201ENST00000365165 102 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 MIR569-201ENST00000385228 96 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 SNORA12.2-201ENST00000391040 156 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 AL360271.2-201ENST00000447710 161 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 AL354714.5-201ENST00000450131 590 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 U8.21-201ENST00000459536 136 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 RPS4XP23-201ENST00000487801 237 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 AC009120.1-201ENST00000493458 473 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 CYCTP-201ENST00000504253 315 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 RNU6-390P-201ENST00000516259 103 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 ACTG1P15-201ENST00000570019 1063 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 MIR3157-201ENST00000578688 85 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 MIR3684-201ENST00000579779 74 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 AC093671.1-201ENST00000624981 2929 ntBASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGA4Q9Y5G9 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGA4Q9Y5G9 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGA4Q9Y5G9 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.71□□□□□ -1.33
PCDHGA4Q9Y5G9 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGA4Q9Y5G9 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGA4Q9Y5G9 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGA4Q9Y5G9 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.71□□□□□ -1.33
PCDHGA4Q9Y5G9 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGA4Q9Y5G9 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGA4Q9Y5G9 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGA4Q9Y5G9 Y_RNA.71-201ENST00000362892 104 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 RNU6-288P-201ENST00000363690 104 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 Y_RNA.218-201ENST00000364218 104 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 Y_RNA.286-201ENST00000364813 102 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 RNU6-1289P-201ENST00000384431 106 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 RNA5SP176-201ENST00000390956 110 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 MIR1204-201ENST00000408388 67 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 CYCSP33-201ENST00000414485 327 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 RPL7AP51-201ENST00000422016 760 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 HSPD1P21-201ENST00000436541 245 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 SNORD2.1-201ENST00000458762 69 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 RPS14P8-201ENST00000478778 369 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 RNU4-57P-201ENST00000515980 135 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 RNA5SP272-201ENST00000516095 111 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 RNU6-27P-201ENST00000516146 107 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 AC104581.2-201ENST00000572227 430 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 MIR4271-201ENST00000582451 67 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 AC006254.2-201ENST00000603259 279 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 RPS4XP21-201ENST00000603814 750 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 MIR15A-201ENST00000607334 83 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 AC010332.2-201ENST00000613083 1904 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 AC010401.2-201ENST00000575137 4934 ntBASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGA4Q9Y5G9 PANDAR-201ENST00000629595 1506 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms