Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHB1Q9Y5F3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHB1Q9Y5F3 AP000860.1-201ENST00000605250 559 ntBASIC4.63□□□□□ -1.67
PCDHB1Q9Y5F3 AL109618.2-201ENST00000605527 211 ntBASIC4.63□□□□□ -1.67
PCDHB1Q9Y5F3 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHB1Q9Y5F3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB1Q9Y5F3 AL139811.1-201ENST00000424779 2299 ntBASIC4.63□□□□□ -1.67
PCDHB1Q9Y5F3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHB1Q9Y5F3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB1Q9Y5F3 DDX18P3-201ENST00000404856 2007 ntBASIC4.63□□□□□ -1.67
PCDHB1Q9Y5F3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB1Q9Y5F3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHB1Q9Y5F3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AL359893.1-201ENST00000447628 1580 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AC092125.1-201ENST00000562568 1995 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 Y_RNA.234-201ENST00000364409 97 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 Y_RNA.296-201ENST00000364930 108 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 RNU6-1207P-201ENST00000384343 107 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 MIR548F1-201ENST00000408667 84 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 EIF4A1P3-201ENST00000411521 244 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AC140479.3-201ENST00000418944 1126 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AL353777.1-201ENST00000425552 326 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AL139415.2-201ENST00000431968 163 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 UBE2V1P13-201ENST00000436983 439 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 PSPHP1-201ENST00000450062 261 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 RPL7P15-201ENST00000461190 712 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 RPS4XP10-201ENST00000465034 731 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 MTND1P3-201ENST00000484956 952 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 COX7A2P2-201ENST00000505291 250 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 RNU2-46P-201ENST00000517038 113 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AC015912.2-201ENST00000571053 181 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AL391840.1-201ENST00000571144 367 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AC233702.9-201ENST00000581528 203 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 HMGN1P30-201ENST00000589286 268 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 HMGB2P1-201ENST00000591146 634 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AP001596.2-201ENST00000608410 312 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 SNORD91B-202ENST00000608459 222 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AL592295.2-201ENST00000612578 206 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AC136475.10-201ENST00000620253 385 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AC244258.1-201ENST00000637553 1071 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 OR5H6-203ENST00000642105 978 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AC125257.1-201ENST00000560400 2930 ntBASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHB1Q9Y5F3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 SCN1A-220ENST00000641603 12506 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 GNG5P1-201ENST00000255500 204 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 U8.3-201ENST00000363321 132 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 RNA5SP515-201ENST00000364570 118 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 RNU6-867P-201ENST00000364956 107 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 VDAC1P9-201ENST00000412766 841 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 RPL36AP36-201ENST00000418616 301 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 PIGFP2-201ENST00000421400 651 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 Z74021.1-201ENST00000423610 407 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 NEK4P1-201ENST00000433383 879 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 MTCYBP45-201ENST00000435243 565 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 CBX1P1-201ENST00000440184 427 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 RPL37P6-202ENST00000464216 403 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 AC109327.1-201ENST00000471666 403 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 RPL23AP41-201ENST00000484754 458 ntBASIC4.61□□□□□ -1.67
PCDHB1Q9Y5F3 NIP7P2-201ENST00000485801 544 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms