Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC021146.1-201ENST00000511202 716 ntBASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 SNORA48.10-201ENST00000516965 160 ntBASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 OR4P1P-201ENST00000530808 1136 ntBASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 AC090502.2-201ENST00000549267 280 ntBASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 SYF2P1-201ENST00000550658 413 ntBASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 AC018755.4-201ENST00000619715 454 ntBASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 AP003355.3-201ENST00000623465 114 ntBASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 AC040168.1-201ENST00000623594 991 ntBASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 CR381572.1-201ENST00000625098 102 ntBASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 AP001002.2-201ENST00000625137 386 ntBASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 AC126544.2-201ENST00000625174 749 ntBASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 AC073073.2-201ENST00000609827 2578 ntBASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 DBF4P1-201ENST00000412976 1892 ntBASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NPIPA1Q9UND3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.21□□□□□ -1.89
NPIPA1Q9UND3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
NPIPA1Q9UND3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
NPIPA1Q9UND3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.89
NPIPA1Q9UND3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.89
NPIPA1Q9UND3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 RNU6-821P-201ENST00000390995 107 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 RPL31P1-201ENST00000398116 372 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 RNU2-71P-201ENST00000411395 189 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC092634.6-201ENST00000418558 192 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 SDCBPP2-201ENST00000424643 885 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC091390.3-201ENST00000426478 338 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AL590103.1-201ENST00000434488 307 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 RPS29P31-201ENST00000446147 164 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 RBMY2UP-201ENST00000453474 324 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 RPS20P24-201ENST00000457473 361 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC008155.2-201ENST00000464337 397 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC013828.1-201ENST00000481845 158 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 SETP14-201ENST00000497538 873 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 RNU6-579P-201ENST00000516879 102 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC093331.1-201ENST00000521474 169 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 MTCO3P15-201ENST00000526563 574 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC087897.1-201ENST00000550134 156 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AL121603.1-201ENST00000553815 142 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AP002802.2-201ENST00000605877 235 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC253576.2-201ENST00000618815 580 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC006963.1-201ENST00000624003 1052 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 AC087821.2-201ENST00000637086 450 ntBASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
NPIPA1Q9UND3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 RNU1-33P-201ENST00000364249 162 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 RNA5SP42-201ENST00000364278 115 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 RNU6-657P-201ENST00000383904 107 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 U3.39-201ENST00000408569 239 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 RPF2P1-201ENST00000424137 906 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms