Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SCN11AQ9UI33 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
SCN11AQ9UI33 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
SCN11AQ9UI33 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SCN11AQ9UI33 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 SNORD114-1-201ENST00000362705 72 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AL024474.1-201ENST00000404655 591 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 VN1R48P-201ENST00000448149 1036 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AADACP1-206ENST00000561502 1193 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 Z99496.1-201ENST00000469424 1477 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AC091564.4-201ENST00000533934 2194 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 GSTA12P-201ENST00000402398 508 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 SNORD88.1-201ENST00000408684 91 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AL034379.1-201ENST00000423216 253 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AC096638.1-201ENST00000444678 216 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 RPL36AP33-201ENST00000450395 310 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AL645939.1-201ENST00000453429 797 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AC025260.1-201ENST00000548858 430 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AC103710.3-201ENST00000608157 948 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AC026634.1-201ENST00000634369 198 ntBASIC3.05□□□□□ -1.92
SCN11AQ9UI33 AC097714.1-201ENST00000511272 1647 ntBASIC3.04□□□□□ -1.92
SCN11AQ9UI33 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.04□□□□□ -1.92
SCN11AQ9UI33 Y_RNA.164-201ENST00000363709 102 ntBASIC3.04□□□□□ -1.92
SCN11AQ9UI33 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.04□□□□□ -1.92
SCN11AQ9UI33 HMGN2P23-201ENST00000456759 269 ntBASIC3.04□□□□□ -1.92
SCN11AQ9UI33 RNU6-548P-201ENST00000517083 115 ntBASIC3.04□□□□□ -1.92
SCN11AQ9UI33 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.04□□□□□ -1.92
SCN11AQ9UI33 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.04□□□□□ -1.92
SCN11AQ9UI33 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.04□□□□□ -1.92
SCN11AQ9UI33 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.04□□□□□ -1.92
SCN11AQ9UI33 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.04□□□□□ -1.92
SCN11AQ9UI33 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
SCN11AQ9UI33 MTND5P27-201ENST00000428871 1720 ntBASIC3.04□□□□□ -1.92
SCN11AQ9UI33 OR4G2P-202ENST00000641004 1759 ntBASIC3.03□□□□□ -1.92
SCN11AQ9UI33 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SCN11AQ9UI33 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SCN11AQ9UI33 NDUFB4P5-201ENST00000415445 361 ntBASIC3.03□□□□□ -1.92
SCN11AQ9UI33 MTCO2P17-201ENST00000424336 677 ntBASIC3.03□□□□□ -1.92
SCN11AQ9UI33 AC013410.1-201ENST00000436223 1232 ntBASIC3.03□□□□□ -1.92
SCN11AQ9UI33 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.03□□□□□ -1.92
SCN11AQ9UI33 IFNWP4-201ENST00000453148 294 ntBASIC3.03□□□□□ -1.92
SCN11AQ9UI33 RPS27AP9-201ENST00000477681 438 ntBASIC3.03□□□□□ -1.92
SCN11AQ9UI33 RPL9P6-201ENST00000492764 598 ntBASIC3.03□□□□□ -1.92
SCN11AQ9UI33 AC112673.1-201ENST00000513168 575 ntBASIC3.03□□□□□ -1.92
SCN11AQ9UI33 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SCN11AQ9UI33 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.03□□□□□ -1.92
SCN11AQ9UI33 AP001317.1-201ENST00000531194 960 ntBASIC3.03□□□□□ -1.92
SCN11AQ9UI33 BX664608.1-201ENST00000610519 487 ntBASIC3.03□□□□□ -1.92
SCN11AQ9UI33 AC000123.2-201ENST00000623124 461 ntBASIC3.03□□□□□ -1.92
SCN11AQ9UI33 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCN11AQ9UI33 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCN11AQ9UI33 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SCN11AQ9UI33 AL161781.1-201ENST00000354277 403 ntBASIC3.02□□□□□ -1.93
SCN11AQ9UI33 RNU1-73P-201ENST00000383971 164 ntBASIC3.02□□□□□ -1.93
SCN11AQ9UI33 AL079342.1-201ENST00000401460 267 ntBASIC3.02□□□□□ -1.93
SCN11AQ9UI33 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.02□□□□□ -1.93
SCN11AQ9UI33 CKS1BP2-201ENST00000497342 240 ntBASIC3.02□□□□□ -1.93
SCN11AQ9UI33 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.02□□□□□ -1.93
SCN11AQ9UI33 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.02□□□□□ -1.93
SCN11AQ9UI33 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.02□□□□□ -1.93
SCN11AQ9UI33 AC068446.3-201ENST00000555285 382 ntBASIC3.02□□□□□ -1.93
SCN11AQ9UI33 AP001004.1-201ENST00000582468 324 ntBASIC3.02□□□□□ -1.93
SCN11AQ9UI33 AC123768.4-201ENST00000616244 701 ntBASIC3.02□□□□□ -1.93
SCN11AQ9UI33 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SCN11AQ9UI33 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SCN11AQ9UI33 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCN11AQ9UI33 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SCN11AQ9UI33 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCN11AQ9UI33 RPS24P8-201ENST00000431490 402 ntBASIC3.02□□□□□ -1.93
SCN11AQ9UI33 CACYBPP1-201ENST00000438592 684 ntBASIC3.02□□□□□ -1.93
SCN11AQ9UI33 RNA5SP281-201ENST00000516504 135 ntBASIC3.02□□□□□ -1.93
SCN11AQ9UI33 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SCN11AQ9UI33 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SCN11AQ9UI33 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
SCN11AQ9UI33 AC104454.1-201ENST00000421341 1401 ntBASIC3.01□□□□□ -1.93
SCN11AQ9UI33 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SCN11AQ9UI33 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SCN11AQ9UI33 AC009501.3-201ENST00000605001 1352 ntBASIC3.01□□□□□ -1.93
SCN11AQ9UI33 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.01□□□□□ -1.93
SCN11AQ9UI33 RPL30P9-201ENST00000465586 330 ntBASIC3.01□□□□□ -1.93
SCN11AQ9UI33 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN11AQ9UI33 AC092436.1-201ENST00000506450 503 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms