Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 AL049781.1-201ENST00000623195 3585 ntBASIC3.35□□□□□ -1.87
LRRC40Q9H9A6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 RNU1-70P-201ENST00000362618 164 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 RNA5SP50-201ENST00000363731 107 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 RNU6-609P-201ENST00000365459 107 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 SNORD116-23-201ENST00000384645 92 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 MIR134-201ENST00000385258 73 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 UBE2D3P2-201ENST00000424409 445 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 AC044797.1-201ENST00000445744 679 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 RPS27P29-201ENST00000463110 252 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 RPL32P14-201ENST00000463196 378 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 GAPDHP39-201ENST00000481866 979 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 RPL21P13-201ENST00000488305 481 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 AC084024.2-201ENST00000503480 791 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 KLHL2P1-201ENST00000508691 521 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 SAP18P1-201ENST00000512058 390 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 AC027338.1-201ENST00000514840 825 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 RNU6-711P-201ENST00000517255 106 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 AC037471.2-201ENST00000564941 598 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 AC098483.2-201ENST00000603158 454 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 AC008962.1-201ENST00000605729 304 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 AL021368.1-201ENST00000607490 540 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 AL355365.1-201ENST00000616480 294 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 ZNF663P-202ENST00000641770 1131 ntBASIC3.34□□□□□ -1.87
LRRC40Q9H9A6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
LRRC40Q9H9A6 MTCO1P4-201ENST00000520516 1409 ntBASIC3.34□□□□□ -1.88
LRRC40Q9H9A6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.34□□□□□ -1.88
LRRC40Q9H9A6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
LRRC40Q9H9A6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.34□□□□□ -1.88
LRRC40Q9H9A6 AL049780.3-201ENST00000624612 1583 ntBASIC3.34□□□□□ -1.88
LRRC40Q9H9A6 NUP58P1-201ENST00000502546 1738 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 RNU6-582P-201ENST00000362989 107 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 SNORD56.3-201ENST00000363507 71 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 SNORA62.3-201ENST00000365110 153 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 MIR200C-201ENST00000384980 68 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 RNA5SP229-201ENST00000410809 99 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 FCF1P2-201ENST00000415284 583 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 HSFY4P-201ENST00000415994 1181 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AC245052.5-201ENST00000416320 649 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 MRPL50P2-201ENST00000416821 482 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 SFR1P2-201ENST00000421841 730 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 GTF2IP23-201ENST00000423746 351 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 GOT2P5-201ENST00000433995 546 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 PDSS1P2-201ENST00000449397 678 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 RPL7P38-201ENST00000488396 739 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AC006499.5-201ENST00000505037 514 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AC010265.1-201ENST00000513509 211 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 RNU6-885P-201ENST00000516607 104 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AC022690.1-201ENST00000526681 550 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AC034105.4-201ENST00000568304 277 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 MTCO3P24-201ENST00000572729 782 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 BDH2P1-201ENST00000602288 736 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AL109618.2-201ENST00000605527 211 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AL157817.1-201ENST00000614264 790 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms