Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC006518.2-201ENST00000542513 940 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.29□□□□□ -1.88
NPAS2Q99743 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS2Q99743 AL845331.3-202ENST00000562856 261 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.29□□□□□ -1.88
NPAS2Q99743 MIR4666A-201ENST00000580160 79 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.29□□□□□ -1.88
NPAS2Q99743 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.29□□□□□ -1.88
NPAS2Q99743 XIAPP1-201ENST00000603162 600 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 AC005776.1-201ENST00000603164 290 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 AC009318.4-201ENST00000620496 486 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 AL512506.2-201ENST00000624472 458 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.29□□□□□ -1.88
NPAS2Q99743 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.29□□□□□ -1.88
NPAS2Q99743 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS2Q99743 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS2Q99743 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NPAS2Q99743 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.28□□□□□ -1.88
NPAS2Q99743 MIR34B-201ENST00000385076 84 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NPAS2Q99743 RPL17P50-201ENST00000396131 546 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 AC097713.2-201ENST00000430199 356 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.28□□□□□ -1.88
NPAS2Q99743 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.28□□□□□ -1.88
NPAS2Q99743 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.28□□□□□ -1.88
NPAS2Q99743 AC127537.2-201ENST00000439258 465 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 AC000041.1-201ENST00000439655 175 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 AC008264.1-201ENST00000447612 367 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 RPL26P28-201ENST00000451325 435 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 CYCSP35-201ENST00000451978 304 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 U3.44-201ENST00000458938 192 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 RN7SL330P-201ENST00000469709 307 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 AL049830.2-201ENST00000480072 201 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.28□□□□□ -1.88
NPAS2Q99743 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS2Q99743 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.28□□□□□ -1.88
NPAS2Q99743 HSPD1P15-201ENST00000505573 1122 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS2Q99743 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS2Q99743 AC074250.1-201ENST00000511117 192 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 AC068657.1-201ENST00000520807 306 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 MTND2P7-201ENST00000521337 640 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.28□□□□□ -1.88
NPAS2Q99743 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NPAS2Q99743 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.28□□□□□ -1.88
NPAS2Q99743 AC093519.1-201ENST00000566109 298 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 GAS5-AS1-201ENST00000602767 694 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 AL161756.2-201ENST00000604597 246 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 AC006329.2-201ENST00000611491 394 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 AL390240.1-201ENST00000612950 384 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 MIR8058-201ENST00000615737 89 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 AC078880.5-201ENST00000617845 421 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 AC018816.2-201ENST00000621460 353 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.28□□□□□ -1.88
NPAS2Q99743 ZNF663P-202ENST00000641770 1131 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 SRP72P2-201ENST00000344851 1979 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS2Q99743 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS2Q99743 ZNF826P-207ENST00000622273 1910 ntBASIC3.28□□□□□ -1.88
NPAS2Q99743 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS2Q99743 AC007256.1-201ENST00000392253 2765 ntBASIC3.28□□□□□ -1.89
NPAS2Q99743 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.89
NPAS2Q99743 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NPAS2Q99743 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.27□□□□□ -1.89
NPAS2Q99743 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPAS2Q99743 MIR148B-201ENST00000362252 99 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 RNU4-35P-201ENST00000362588 141 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 RNA5SP383-201ENST00000362934 120 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 RNU6-582P-201ENST00000362989 107 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 RNU6-839P-201ENST00000363347 108 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPAS2Q99743 RNU6-207P-201ENST00000384137 107 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NPAS2Q99743 SNORD17-201ENST00000390930 237 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 RNU4-65P-201ENST00000410473 140 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 RNU2-72P-201ENST00000411175 163 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.27□□□□□ -1.89
NPAS2Q99743 FCF1P2-201ENST00000415284 583 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 MTCO2P1-201ENST00000424648 477 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.27□□□□□ -1.89
NPAS2Q99743 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.27□□□□□ -1.89
NPAS2Q99743 RPL31P54-201ENST00000429803 370 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 ARF4P2-201ENST00000430209 526 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 AC005345.1-201ENST00000431868 217 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 RPL23AP22-201ENST00000437556 453 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 FTH1P1-201ENST00000437933 532 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 SSXP4-201ENST00000451349 245 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 RPS17P11-201ENST00000474297 293 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NPAS2Q99743 AC091860.1-201ENST00000505723 432 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 AC004062.1-201ENST00000509926 645 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.27□□□□□ -1.89
NPAS2Q99743 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.27□□□□□ -1.89
NPAS2Q99743 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.27□□□□□ -1.89
NPAS2Q99743 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.27□□□□□ -1.89
NPAS2Q99743 SULT1C2P1-202ENST00000562418 459 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 AC087481.2-201ENST00000565492 330 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 MIR4474-201ENST00000579189 78 ntBASIC3.27□□□□□ -1.89
NPAS2Q99743 ELOCP35-201ENST00000604289 336 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms