Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.43□□□□□ -1.54
BRF1Q92994 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.43□□□□□ -1.54
BRF1Q92994 OR10AB1P-201ENST00000609613 938 ntBASIC5.43□□□□□ -1.54
BRF1Q92994 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF1Q92994 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF1Q92994 AC006504.8-201ENST00000621046 635 ntBASIC5.43□□□□□ -1.54
BRF1Q92994 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.43□□□□□ -1.54
BRF1Q92994 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BRF1Q92994 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BRF1Q92994 AC092447.10-201ENST00000620607 1652 ntBASIC5.43□□□□□ -1.54
BRF1Q92994 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
BRF1Q92994 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.43□□□□□ -1.54
BRF1Q92994 NUP58P1-201ENST00000502546 1738 ntBASIC5.43□□□□□ -1.54
BRF1Q92994 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRF1Q92994 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRF1Q92994 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
BRF1Q92994 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
BRF1Q92994 Y_RNA.72-201ENST00000362894 103 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BRF1Q92994 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
BRF1Q92994 RPL31P1-201ENST00000398116 372 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 RPS4XP8-201ENST00000402039 771 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 AC078974.1-201ENST00000411597 223 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF1Q92994 RPS20P15-201ENST00000412792 311 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 AL031736.2-201ENST00000426573 787 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 RPL36P19-201ENST00000430744 301 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 RPL7P54-201ENST00000438336 674 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF1Q92994 HSPE1P28-201ENST00000443139 211 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 AC243772.1-201ENST00000451620 410 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 ISCUP1-201ENST00000454451 448 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 RPS20P24-201ENST00000457473 361 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 RPL35AP28-201ENST00000459730 331 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.42□□□□□ -1.54
BRF1Q92994 AC005726.1-201ENST00000494679 427 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.42□□□□□ -1.54
BRF1Q92994 AC007016.1-201ENST00000512110 244 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.42□□□□□ -1.54
BRF1Q92994 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF1Q92994 AP003072.2-201ENST00000527756 676 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 OR8L1P-201ENST00000534005 955 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF1Q92994 AC009101.1-201ENST00000568135 242 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.42□□□□□ -1.54
BRF1Q92994 AC024940.4-201ENST00000605507 246 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 AC055876.5-201ENST00000605667 259 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 U3.53-201ENST00000628922 216 ntBASIC5.42□□□□□ -1.54
BRF1Q92994 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
BRF1Q92994 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRF1Q92994 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BRF1Q92994 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRF1Q92994 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRF1Q92994 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRF1Q92994 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRF1Q92994 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.42□□□□□ -1.54
BRF1Q92994 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
BRF1Q92994 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
BRF1Q92994 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF1Q92994 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BRF1Q92994 RN7SKP115-201ENST00000363177 317 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 MIR921-201ENST00000401133 56 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 AL024474.1-201ENST00000404655 591 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 USP9YP9-201ENST00000429406 715 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF1Q92994 CEACAMP9-201ENST00000442990 513 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.41□□□□□ -1.54
BRF1Q92994 FDX1P2-201ENST00000450769 375 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.41□□□□□ -1.54
BRF1Q92994 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
BRF1Q92994 SCARNA10-201ENST00000459255 330 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 AC083798.1-201ENST00000472671 131 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF1Q92994 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.41□□□□□ -1.54
BRF1Q92994 AC111000.3-201ENST00000508057 576 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.41□□□□□ -1.54
BRF1Q92994 RNA5SP446-201ENST00000515955 82 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 OR5D15P-201ENST00000531671 942 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.41□□□□□ -1.54
BRF1Q92994 ARL2BPP2-201ENST00000550907 489 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.41□□□□□ -1.54
BRF1Q92994 HIF1AP1-201ENST00000553642 175 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 AL109766.1-201ENST00000555080 552 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.41□□□□□ -1.54
BRF1Q92994 MIR3167-201ENST00000579623 85 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 RPL23AP92-201ENST00000603609 255 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 AC005034.5-201ENST00000604219 466 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 AC008966.2-201ENST00000606157 453 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 AC007038.2-201ENST00000608095 740 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 AC064836.2-201ENST00000609491 462 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.41□□□□□ -1.54
BRF1Q92994 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.41□□□□□ -1.54
BRF1Q92994 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
BRF1Q92994 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
BRF1Q92994 NMD3P1-201ENST00000439704 1488 ntBASIC5.4□□□□□ -1.54
BRF1Q92994 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
BRF1Q92994 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
BRF1Q92994 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
BRF1Q92994 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.4□□□□□ -1.54
BRF1Q92994 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms