Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 RPL12P25-202ENST00000598100 674 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 RPL23AP92-201ENST00000603609 255 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AL359999.1-201ENST00000604513 294 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AC113403.1-201ENST00000604910 193 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AF250324.2-201ENST00000608299 610 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AC091304.9-201ENST00000612091 226 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AL355073.2-201ENST00000612106 557 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AC090517.2-201ENST00000614966 680 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AC072046.2-201ENST00000618366 268 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AP001005.3-201ENST00000622049 129 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 CR381653.2-201ENST00000624041 768 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AP001784.1-201ENST00000624107 428 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 NOL8P1-201ENST00000508336 3529 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4AQ8WYN0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AC025031.4-201ENST00000621248 3271 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 SAGE4P-201ENST00000442271 3381 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 CCT4P2-201ENST00000233836 1548 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 RN7SKP103-201ENST00000363848 320 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 RNVU1-6-201ENST00000364688 164 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 RNU6-744P-201ENST00000365557 107 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 RNU6-1316P-201ENST00000384242 108 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 MTCO2P5-201ENST00000422621 426 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 RPL12P34-201ENST00000424532 479 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 RPL23AP1-201ENST00000428990 471 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 RABEPKP1-201ENST00000440529 1026 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 HSPE1P28-201ENST00000443139 211 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 MTCO3P38-201ENST00000468910 766 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AL136126.1-201ENST00000473603 402 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AC017037.1-201ENST00000508460 471 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 RNU6-314P-201ENST00000516574 104 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AC124947.2-202ENST00000552735 133 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 MIR4700-201ENST00000578311 74 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AP000860.1-201ENST00000605250 559 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AL513477.2-201ENST00000607858 568 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AL136295.6-201ENST00000610486 658 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AL049539.1-201ENST00000611964 459 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AC090970.3-201ENST00000612566 866 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 uc_338.13-201ENST00000618243 179 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AC009318.4-201ENST00000620496 486 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AL122126.1-201ENST00000546905 1318 ntBASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.38□□□□□ -1.71
ATG4AQ8WYN0 FARSBP1-201ENST00000435808 1778 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 KPNA2P2-201ENST00000419546 1489 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 OR56B2P-202ENST00000641377 2453 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 ELF2P3-201ENST00000445099 1506 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AC087190.4-201ENST00000574616 8334 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 RNU6-146P-201ENST00000384602 108 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 MIR585-201ENST00000384887 94 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 BTF3P7-201ENST00000407097 488 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 SNORA11F-201ENST00000408237 128 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 RNA5SP36-201ENST00000410197 133 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 RNA5SP306-201ENST00000411087 107 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 EIF1P3-201ENST00000423841 334 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 USP9YP18-201ENST00000425912 695 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms