Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SNRPGP16-201ENST00000533275 226 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 HPRT1P3-201ENST00000539521 576 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AL049870.4-201ENST00000555741 486 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC087499.8-201ENST00000578406 226 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 MIR4276-201ENST00000584832 70 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 RPL23AP92-201ENST00000603609 255 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AL162713.1-201ENST00000604480 262 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AP004372.1-201ENST00000604842 844 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC128687.1-201ENST00000605304 619 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC015849.2-201ENST00000605738 409 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC135803.1-201ENST00000608748 565 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC012640.5-201ENST00000623897 319 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC009039.2-201ENST00000624524 529 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 MIR203B-201ENST00000636080 86 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 FAM133CP-201ENST00000332869 704 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 RNU5D-1-201ENST00000363299 116 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 SNORA68.1-201ENST00000364537 132 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 SNORA9.2-201ENST00000365361 133 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 SNORA6-201ENST00000384033 151 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 RNU4-31P-201ENST00000384211 141 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 SNORA70C-201ENST00000384538 135 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 MIR1193-201ENST00000408109 78 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 U3.40-201ENST00000408706 208 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 RNA5SP317-201ENST00000410176 116 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 RNU4-78P-201ENST00000410940 126 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 RNA5SP311-201ENST00000411290 116 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AL512504.1-201ENST00000415494 778 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AL513175.2-201ENST00000422071 443 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 MTCO3P30-201ENST00000426425 670 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC009414.1-201ENST00000427200 443 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 SRIP2-201ENST00000428470 166 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AL590762.3-201ENST00000436372 640 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 RPL7P61-201ENST00000451721 751 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AL139109.1-201ENST00000455491 297 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 RPS7P7-201ENST00000463499 571 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 RPL31P41-201ENST00000477967 372 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC108734.3-201ENST00000481241 1165 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 RPS27P21-201ENST00000486977 252 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC022493.1-201ENST00000492984 337 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC008953.1-201ENST00000497334 318 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 KLRA1P-201ENST00000503499 986 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC093720.1-201ENST00000505681 714 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC108157.1-201ENST00000510511 539 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 PRELID3BP4-201ENST00000515476 571 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 RNA5SP315-201ENST00000516340 116 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 RNU4-18P-201ENST00000516751 149 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 SCARNA14-201ENST00000516903 136 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 RNA5SP312-201ENST00000517068 116 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 IGHVII-60-1-201ENST00000519079 256 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 HMGB1P46-201ENST00000520062 610 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC103843.2-201ENST00000530523 682 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC090751.1-201ENST00000566966 267 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 TPMTP1-201ENST00000592307 737 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC106900.2-201ENST00000604994 317 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC008277.2-201ENST00000605196 797 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC133644.2-201ENST00000608142 540 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 CR848007.1-201ENST00000442354 1699 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 AC012321.1-201ENST00000561622 1588 ntBASIC1.51□□□□□ -2.17
SPTSSBQ8NFR3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SPTSSBQ8NFR3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SPTSSBQ8NFR3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SPTSSBQ8NFR3 AL109809.4-201ENST00000603520 2185 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms