Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 TVP23BP1-201ENST00000557500 617 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 ANP32BP3-201ENST00000559213 706 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 HMGB1P33-201ENST00000563485 527 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 MIR4307-201ENST00000582802 84 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC008277.2-201ENST00000605196 797 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 BCRP9-201ENST00000605312 388 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AL390208.1-201ENST00000605885 644 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AL121757.2-201ENST00000611223 313 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 MIR8069-1-201ENST00000616627 86 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 uc_338.9-201ENST00000617424 182 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 MIR8069-2-201ENST00000621412 86 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC112200.1-201ENST00000625015 234 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 CDRT1-208ENST00000630868 794 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 LINC01355-201ENST00000566551 5444 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC107068.1-201ENST00000563286 4218 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 CASC19-204ENST00000641001 2055 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 CASC19-280ENST00000642102 1351 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 RNU6-777P-201ENST00000364265 104 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 RNA5SP513-201ENST00000364648 118 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 Y_RNA.296-201ENST00000364930 108 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 RNU6-657P-201ENST00000383904 107 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 snosnR66.1-201ENST00000391095 99 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 PTMAP2-201ENST00000397627 327 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 RN7SKP159-201ENST00000410657 292 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC009237.10-201ENST00000414112 510 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 RWDD4P2-201ENST00000426392 563 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AL451074.3-201ENST00000437709 472 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 CBX1P4-201ENST00000439415 457 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 MEMO1P3-201ENST00000459811 302 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC079804.1-201ENST00000461922 436 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 RPS27AP17-201ENST00000463344 455 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 RPL23AP12-201ENST00000467573 473 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC022795.1-201ENST00000473808 480 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 ACTR3P3-201ENST00000480448 893 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 RN7SL691P-201ENST00000494487 301 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 RPS27AP13-201ENST00000498403 237 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 KLRA1P-201ENST00000503499 986 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 RNA5SP49-201ENST00000516450 115 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC013828.2-201ENST00000532487 235 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AL389895.1-201ENST00000554127 252 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC060780.3-201ENST00000589464 80 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AL049634.3-201ENST00000604968 457 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC097468.3-201ENST00000607956 456 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 MIR6075-201ENST00000620782 95 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AP003122.6-201ENST00000623831 495 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC231657.1-201ENST00000624313 397 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC116563.2-201ENST00000624751 535 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 AC092326.2-201ENST00000624772 1561 ntBASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A3Q8N4M1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A3Q8N4M1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms