Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.82□□□□□ -1.32
VARS2Q5ST30 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VARS2Q5ST30 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VARS2Q5ST30 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VARS2Q5ST30 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VARS2Q5ST30 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VARS2Q5ST30 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 RNU1-24P-201ENST00000364285 165 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 RNU6-514P-201ENST00000384208 107 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 SNORA20-201ENST00000384662 132 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 RNU6-1275P-201ENST00000391087 107 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 AL109941.1-201ENST00000401925 229 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 CHEK2P5-201ENST00000423877 246 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 RPL12P12-201ENST00000424633 501 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 MTATP6P7-201ENST00000453315 681 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 RN7SL177P-201ENST00000476596 299 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 RN7SL369P-201ENST00000477138 299 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 AC091959.1-201ENST00000495857 238 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 IGHV4-55-201ENST00000520889 368 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 AL133271.1-201ENST00000538229 291 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 AL133393.1-201ENST00000603277 287 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 AL158032.1-201ENST00000605401 106 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 AL161901.1-201ENST00000624954 3425 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VARS2Q5ST30 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VARS2Q5ST30 AC000374.1-201ENST00000434698 1745 ntBASIC6.81□□□□□ -1.32
VARS2Q5ST30 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VARS2Q5ST30 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VARS2Q5ST30 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VARS2Q5ST30 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VARS2Q5ST30 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC6.81□□□□□ -1.32
VARS2Q5ST30 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VARS2Q5ST30 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARS2Q5ST30 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VARS2Q5ST30 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARS2Q5ST30 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VARS2Q5ST30 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARS2Q5ST30 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VARS2Q5ST30 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARS2Q5ST30 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARS2Q5ST30 CBX1P4-201ENST00000439415 457 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 AC008264.1-201ENST00000447612 367 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 AC022795.1-201ENST00000473808 480 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 RN7SL174P-201ENST00000475578 289 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 RPL12P30-201ENST00000488389 499 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 RPL30P11-201ENST00000495304 339 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 AC016065.2-201ENST00000514530 444 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 MIR2355-201ENST00000517199 87 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 AP003327.1-201ENST00000529684 127 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VARS2Q5ST30 TRAV32-201ENST00000553993 340 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 NDUFB4P11-201ENST00000560510 395 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 MIR4659A-201ENST00000580269 81 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 AC067852.4-201ENST00000590314 478 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARS2Q5ST30 AC022031.1-201ENST00000585985 2593 ntBASIC6.8□□□□□ -1.32
VARS2Q5ST30 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VARS2Q5ST30 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARS2Q5ST30 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VARS2Q5ST30 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC6.8□□□□□ -1.32
VARS2Q5ST30 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VARS2Q5ST30 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VARS2Q5ST30 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
VARS2Q5ST30 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VARS2Q5ST30 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VARS2Q5ST30 AC112243.1-201ENST00000623949 3851 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.79□□□□□ -1.32
VARS2Q5ST30 NCAPGP1-201ENST00000505112 1814 ntBASIC6.79□□□□□ -1.32
VARS2Q5ST30 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms