Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 RNA5SP513-201ENST00000364648 118 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 SNORD82-201ENST00000365530 70 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 RNU2-66P-201ENST00000410650 161 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 RPS7P13-201ENST00000413955 498 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AL445669.1-201ENST00000426743 755 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AL132765.1-201ENST00000434165 553 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 ISCUP1-201ENST00000454451 448 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 DNAJC19P1-201ENST00000455312 319 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 OR9M1P-201ENST00000459641 921 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AC053481.1-201ENST00000467217 306 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 RPL23AP2-201ENST00000471227 466 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AC096751.1-202ENST00000502691 1067 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 RPL37P25-201ENST00000507308 276 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AC022861.1-201ENST00000522981 663 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AP003392.2-201ENST00000527269 208 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AP002748.2-201ENST00000528671 348 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AC136619.2-201ENST00000563361 631 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AC083760.1-201ENST00000589621 670 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AC091805.2-201ENST00000603848 235 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 PRELID3BP8-201ENST00000604148 295 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AC005609.4-201ENST00000625071 447 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 AC092447.7-201ENST00000422212 1621 ntBASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A4Q53GD3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC093535.2-201ENST00000624769 2326 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AL391684.1-202ENST00000641293 1636 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 FGF7P2-201ENST00000332473 296 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 MIR383-201ENST00000362257 73 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 RNU5E-4P-201ENST00000364931 120 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 RNY3P14-201ENST00000384309 102 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AL592291.1-201ENST00000403830 352 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 U3.35-201ENST00000408405 208 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 MIR548F1-201ENST00000408667 84 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 RPL17P12-201ENST00000413391 526 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 FNDC3CP-201ENST00000420795 1155 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 OR51AB1P-201ENST00000429046 620 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AL596276.1-201ENST00000434465 418 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 RPL23AP74-201ENST00000437246 471 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 OR6K1P-201ENST00000456766 971 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 BTF3P5-201ENST00000457252 467 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 RNA5SP269-201ENST00000459032 137 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 MTAPP1-201ENST00000489154 819 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 POU5F1P7-201ENST00000508759 541 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC034159.1-201ENST00000513885 583 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC116347.2-201ENST00000514912 523 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 RNA5SP154-201ENST00000516193 111 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC023632.4-201ENST00000517783 191 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 IGHV3-32-201ENST00000519182 355 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 COX6CP8-201ENST00000522620 226 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC022790.1-201ENST00000522872 204 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 HSPA8P13-201ENST00000523715 472 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC068446.3-201ENST00000555285 382 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 MTCO3P24-201ENST00000572729 782 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC090312.1-201ENST00000580637 348 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A4Q53GD3 AC006065.6-201ENST00000625201 545 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms