Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC96Q2M329 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC96Q2M329 RAD23BP2-201ENST00000416003 1207 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 AIMP1P1-201ENST00000418670 937 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 AL035410.1-201ENST00000427409 427 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 MRPS18BP2-201ENST00000434310 759 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC96Q2M329 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC96Q2M329 AF228730.2-201ENST00000438784 848 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC96Q2M329 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC96Q2M329 HMGB3P8-201ENST00000449709 577 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 RPS24P6-201ENST00000452670 400 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC96Q2M329 UBDP1-202ENST00000457888 382 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 RPL23AP44-201ENST00000482216 473 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 AL024509.2-201ENST00000493462 493 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 AC108941.1-201ENST00000502853 530 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 BOLA3P3-201ENST00000505182 232 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC96Q2M329 AC010342.1-201ENST00000514047 877 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC96Q2M329 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC96Q2M329 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC96Q2M329 MIR4666A-201ENST00000580160 79 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 MIR5187-201ENST00000583479 76 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 BNIP3P33-201ENST00000598912 569 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 MRPS35P3-201ENST00000603189 709 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 AC025588.2-201ENST00000604851 466 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC96Q2M329 LINC02211-204ENST00000642024 1070 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC96Q2M329 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC96Q2M329 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC96Q2M329 MTND4P34-201ENST00000572715 1371 ntBASIC4.37□□□□□ -1.71
CCDC96Q2M329 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 RNA5SP258-201ENST00000362750 119 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 RNU6-839P-201ENST00000363347 108 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 RNU1-89P-201ENST00000384592 164 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 Z75741.2-201ENST00000417272 1167 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 TOMM22P1-201ENST00000418578 312 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 HMGB1P49-201ENST00000418882 569 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 AC010285.1-201ENST00000470580 392 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 AC104619.4-201ENST00000510773 249 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 AC119751.5-201ENST00000514077 770 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 AP001636.2-201ENST00000525517 696 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 AP000790.1-201ENST00000528891 737 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 AL121603.1-201ENST00000553815 142 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 AL163153.1-201ENST00000554223 283 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 MTND3P19-201ENST00000603825 345 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 AL137849.1-201ENST00000604767 169 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 AC128687.1-201ENST00000605304 619 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 AC092106.3-201ENST00000611308 722 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 AC048344.4-201ENST00000619744 527 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 AC092650.2-201ENST00000619984 902 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 AC109454.4-201ENST00000623411 649 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 AC120349.3-201ENST00000624377 529 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 ZNF663P-202ENST00000641770 1131 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC96Q2M329 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC96Q2M329 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC96Q2M329 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.36□□□□□ -1.71
CCDC96Q2M329 HMGB1P5-201ENST00000255320 642 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 RNU6-50P-201ENST00000362356 103 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 RNU6-251P-201ENST00000363235 104 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 RNU6-1249P-201ENST00000363237 111 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 RNU6-730P-201ENST00000383954 104 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 RNU6-629P-201ENST00000384061 103 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 RNU6-636P-201ENST00000384598 107 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AL079342.2-201ENST00000403367 482 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AL133264.1-201ENST00000407157 562 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 ELOCP9-201ENST00000418624 239 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 AC005345.1-201ENST00000431868 217 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 RPL7P34-201ENST00000433316 712 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC96Q2M329 EEF1A1P39-201ENST00000440791 250 ntBASIC4.35□□□□□ -1.71
CCDC96Q2M329 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCDC96Q2M329 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms