Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CACNA1SQ13698 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CACNA1SQ13698 AP001148.1-201ENST00000624124 2359 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 AC087565.3-202ENST00000642085 1603 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 AC016717.2-201ENST00000609089 5141 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CACNA1SQ13698 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 MIR92A2-201ENST00000385299 75 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 ATP5F1P6-201ENST00000402768 767 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 AC092832.1-201ENST00000422934 400 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 MRPL50P4-201ENST00000446432 475 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 snoU13.23-201ENST00000458863 104 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 RNU6-1218P-201ENST00000458990 108 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 CCNHP1-201ENST00000513311 678 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 MIR4458-201ENST00000578872 75 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 AC092608.2-201ENST00000624427 218 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 AC138915.3-201ENST00000562908 1389 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CACNA1SQ13698 RNU4-53P-201ENST00000410828 140 ntBASIC3.12□□□□□ -1.91
CACNA1SQ13698 AL138785.1-201ENST00000425821 331 ntBASIC3.12□□□□□ -1.91
CACNA1SQ13698 RPL23AP74-201ENST00000437246 471 ntBASIC3.12□□□□□ -1.91
CACNA1SQ13698 HMGN1P5-201ENST00000448591 263 ntBASIC3.12□□□□□ -1.91
CACNA1SQ13698 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.12□□□□□ -1.91
CACNA1SQ13698 MTCYBP14-201ENST00000457471 715 ntBASIC3.12□□□□□ -1.91
CACNA1SQ13698 AC021087.2-201ENST00000504656 1203 ntBASIC3.12□□□□□ -1.91
CACNA1SQ13698 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.12□□□□□ -1.91
CACNA1SQ13698 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.12□□□□□ -1.91
CACNA1SQ13698 AL845331.3-202ENST00000562856 261 ntBASIC3.12□□□□□ -1.91
CACNA1SQ13698 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CACNA1SQ13698 AC008277.2-201ENST00000605196 797 ntBASIC3.12□□□□□ -1.91
CACNA1SQ13698 AC018754.1-201ENST00000607486 925 ntBASIC3.12□□□□□ -1.91
CACNA1SQ13698 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.12□□□□□ -1.91
CACNA1SQ13698 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.12□□□□□ -1.91
CACNA1SQ13698 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
CACNA1SQ13698 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CACNA1SQ13698 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CACNA1SQ13698 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 RNA5SP167-201ENST00000365461 116 ntBASIC3.11□□□□□ -1.91
CACNA1SQ13698 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 RPS20P5-201ENST00000434808 360 ntBASIC3.11□□□□□ -1.91
CACNA1SQ13698 HMGB3P12-201ENST00000438745 556 ntBASIC3.11□□□□□ -1.91
CACNA1SQ13698 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 AP000893.1-201ENST00000474462 794 ntBASIC3.11□□□□□ -1.91
CACNA1SQ13698 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 RNU6-319P-201ENST00000516025 108 ntBASIC3.11□□□□□ -1.91
CACNA1SQ13698 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CACNA1SQ13698 AC009159.1-201ENST00000618386 642 ntBASIC3.11□□□□□ -1.91
CACNA1SQ13698 RPL23AP61-201ENST00000623642 466 ntBASIC3.11□□□□□ -1.91
CACNA1SQ13698 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CACNA1SQ13698 ZNF542P-204ENST00000482727 1305 ntBASIC3.11□□□□□ -1.91
CACNA1SQ13698 AL512633.1-201ENST00000399931 655 ntBASIC3.11□□□□□ -1.91
CACNA1SQ13698 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 AC080125.1-201ENST00000414888 684 ntBASIC3.11□□□□□ -1.91
CACNA1SQ13698 CACYBPP1-201ENST00000438592 684 ntBASIC3.11□□□□□ -1.91
CACNA1SQ13698 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CACNA1SQ13698 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 FAM106CP-201ENST00000582212 507 ntBASIC3.11□□□□□ -1.91
CACNA1SQ13698 AC012213.4-201ENST00000606457 354 ntBASIC3.11□□□□□ -1.91
CACNA1SQ13698 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.11□□□□□ -1.91
CACNA1SQ13698 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CACNA1SQ13698 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CACNA1SQ13698 RPL9P7-201ENST00000330965 580 ntBASIC3.1□□□□□ -1.91
CACNA1SQ13698 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.1□□□□□ -1.91
CACNA1SQ13698 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CACNA1SQ13698 MTCO3P31-201ENST00000405526 789 ntBASIC3.1□□□□□ -1.91
CACNA1SQ13698 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CACNA1SQ13698 AC006445.2-201ENST00000510061 472 ntBASIC3.1□□□□□ -1.91
CACNA1SQ13698 IGKV2-36-201ENST00000519999 223 ntBASIC3.1□□□□□ -1.91
CACNA1SQ13698 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.1□□□□□ -1.91
CACNA1SQ13698 AC010620.2-201ENST00000600135 313 ntBASIC3.1□□□□□ -1.91
CACNA1SQ13698 AC019131.2-201ENST00000609071 870 ntBASIC3.1□□□□□ -1.91
CACNA1SQ13698 Z99129.2-201ENST00000619967 314 ntBASIC3.1□□□□□ -1.91
CACNA1SQ13698 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CACNA1SQ13698 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.1□□□□□ -1.91
CACNA1SQ13698 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CACNA1SQ13698 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CACNA1SQ13698 AC091152.2-201ENST00000591628 2569 ntBASIC3.09□□□□□ -1.91
CACNA1SQ13698 HMGB1P13-201ENST00000406019 642 ntBASIC3.09□□□□□ -1.91
CACNA1SQ13698 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.09□□□□□ -1.91
CACNA1SQ13698 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.09□□□□□ -1.91
CACNA1SQ13698 HIGD1AP2-201ENST00000446367 280 ntBASIC3.09□□□□□ -1.91
CACNA1SQ13698 AP000873.1-201ENST00000463987 400 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms