Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 CENPUP2-201ENST00000555897 1186 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.23□□□□□ -1.89
SMARCB1Q12824 AC103988.1-201ENST00000566382 2177 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.23□□□□□ -1.89
SMARCB1Q12824 AC034268.2-201ENST00000571784 482 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 LARP7P3-201ENST00000579888 337 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.23□□□□□ -1.89
SMARCB1Q12824 AC008507.1-201ENST00000587506 734 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.23□□□□□ -1.89
SMARCB1Q12824 NTAN1P1-201ENST00000603150 646 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 AC245100.7-201ENST00000609678 442 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMARCB1Q12824 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.23□□□□□ -1.89
SMARCB1Q12824 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.22□□□□□ -1.89
SMARCB1Q12824 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMARCB1Q12824 RNA5SP383-201ENST00000362934 120 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SMARCB1Q12824 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SMARCB1Q12824 RPL22P22-201ENST00000395439 379 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.22□□□□□ -1.89
SMARCB1Q12824 BX664727.1-201ENST00000416024 466 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC245291.1-201ENST00000419501 328 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 SDCBPP3-201ENST00000419629 891 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC073310.1-201ENST00000423226 1033 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC107083.1-201ENST00000439643 279 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.22□□□□□ -1.89
SMARCB1Q12824 RPL7P55-201ENST00000450522 746 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC096992.1-201ENST00000459808 709 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 RPL32P14-201ENST00000463196 378 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC083906.5-201ENST00000503722 328 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC121161.1-201ENST00000510606 652 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 SCARNA20.6-201ENST00000517251 106 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC009812.2-201ENST00000517657 457 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC008562.1-201ENST00000521763 330 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC104027.1-201ENST00000521887 300 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.22□□□□□ -1.89
SMARCB1Q12824 MIR4506-201ENST00000584693 77 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC026741.1-201ENST00000605892 482 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC024595.1-201ENST00000623088 387 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.22□□□□□ -1.89
SMARCB1Q12824 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC022031.1-201ENST00000585985 2593 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMARCB1Q12824 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMARCB1Q12824 AC010733.2-201ENST00000589496 5702 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
SMARCB1Q12824 ZNF807-201ENST00000328088 1707 ntBASIC3.22□□□□□ -1.89
SMARCB1Q12824 FAM35BP-202ENST00000497389 3337 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SMARCB1Q12824 AL049737.1-201ENST00000413920 1403 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.21□□□□□ -1.9
SMARCB1Q12824 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.21□□□□□ -1.9
SMARCB1Q12824 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SMARCB1Q12824 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SMARCB1Q12824 RNU6-7-201ENST00000364784 107 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 RNU6-8-201ENST00000365467 107 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 RNU6-1293P-201ENST00000384077 107 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SMARCB1Q12824 SNORD67-201ENST00000390833 111 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 U3.26-201ENST00000391236 204 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 RPL5P18-201ENST00000406671 891 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 COTL1P1-201ENST00000422309 375 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 FO393414.1-201ENST00000428697 1184 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.21□□□□□ -1.9
SMARCB1Q12824 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SMARCB1Q12824 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.21□□□□□ -1.9
SMARCB1Q12824 DNAJC19P8-201ENST00000452887 259 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 AC104308.1-201ENST00000454621 333 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 RPL21P104-201ENST00000464143 478 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 AC104689.1-201ENST00000473356 768 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 AC108078.3-201ENST00000502633 489 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.21□□□□□ -1.9
SMARCB1Q12824 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.21□□□□□ -1.9
SMARCB1Q12824 RN7SKP282-201ENST00000516824 299 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 RNU6-467P-201ENST00000517027 110 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 RNU6-334P-201ENST00000517072 102 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 COX6B1P6-201ENST00000522347 255 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.21□□□□□ -1.9
SMARCB1Q12824 C1DP5-201ENST00000525775 383 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 OR4R2P-201ENST00000530815 597 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 OR8L1P-201ENST00000534005 955 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.21□□□□□ -1.9
SMARCB1Q12824 AC027104.1-201ENST00000563702 681 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SMARCB1Q12824 MAGOH2P-202ENST00000584384 429 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 AC006023.2-201ENST00000609916 167 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 AC096586.1-201ENST00000610267 561 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 RNU6-156P-201ENST00000621869 107 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.21□□□□□ -1.9
SMARCB1Q12824 API5P2-201ENST00000397055 1498 ntBASIC3.21□□□□□ -1.9
SMARCB1Q12824 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SMARCB1Q12824 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMARCB1Q12824 AC096644.4-201ENST00000563417 2912 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms