Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4□□□□□ -1.77
HMGXB3Q12766 AC106872.2-201ENST00000494303 480 ntBASIC4□□□□□ -1.77
HMGXB3Q12766 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4□□□□□ -1.77
HMGXB3Q12766 RNA5SP445-201ENST00000515889 115 ntBASIC4□□□□□ -1.77
HMGXB3Q12766 SCARNA16.3-201ENST00000516595 184 ntBASIC4□□□□□ -1.77
HMGXB3Q12766 AK6P1-201ENST00000540219 478 ntBASIC4□□□□□ -1.77
HMGXB3Q12766 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4□□□□□ -1.77
HMGXB3Q12766 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4□□□□□ -1.77
HMGXB3Q12766 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4□□□□□ -1.77
HMGXB3Q12766 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4□□□□□ -1.77
HMGXB3Q12766 OOSP1P2-201ENST00000579644 351 ntBASIC4□□□□□ -1.77
HMGXB3Q12766 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4□□□□□ -1.77
HMGXB3Q12766 AL359893.1-201ENST00000447628 1580 ntBASIC4□□□□□ -1.77
HMGXB3Q12766 AC025125.1-201ENST00000624743 1922 ntBASIC4□□□□□ -1.77
HMGXB3Q12766 NPM1P10-201ENST00000398310 865 ntBASIC4□□□□□ -1.77
HMGXB3Q12766 AL445213.1-201ENST00000412589 747 ntBASIC4□□□□□ -1.77
HMGXB3Q12766 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4□□□□□ -1.77
HMGXB3Q12766 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4□□□□□ -1.77
HMGXB3Q12766 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4□□□□□ -1.77
HMGXB3Q12766 ZDHHC20P3-201ENST00000531576 336 ntBASIC4□□□□□ -1.77
HMGXB3Q12766 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4□□□□□ -1.77
HMGXB3Q12766 AC091515.1-201ENST00000548110 679 ntBASIC4□□□□□ -1.77
HMGXB3Q12766 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGXB3Q12766 RNU1-17P-201ENST00000363022 152 ntBASIC3.99□□□□□ -1.77
HMGXB3Q12766 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.99□□□□□ -1.77
HMGXB3Q12766 AL606490.7-201ENST00000433136 191 ntBASIC3.99□□□□□ -1.77
HMGXB3Q12766 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.99□□□□□ -1.77
HMGXB3Q12766 COX6CP2-201ENST00000444980 225 ntBASIC3.99□□□□□ -1.77
HMGXB3Q12766 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGXB3Q12766 AC108729.3-201ENST00000513484 108 ntBASIC3.99□□□□□ -1.77
HMGXB3Q12766 AF186190.1-201ENST00000517470 480 ntBASIC3.99□□□□□ -1.77
HMGXB3Q12766 snoU13.31-201ENST00000607291 104 ntBASIC3.99□□□□□ -1.77
HMGXB3Q12766 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HMGXB3Q12766 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGXB3Q12766 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGXB3Q12766 MTATP6P11-201ENST00000428071 670 ntBASIC3.98□□□□□ -1.77
HMGXB3Q12766 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGXB3Q12766 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGXB3Q12766 XKRY-201ENST00000510392 1100 ntBASIC3.98□□□□□ -1.77
HMGXB3Q12766 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGXB3Q12766 RNA5SP200-201ENST00000516360 103 ntBASIC3.98□□□□□ -1.77
HMGXB3Q12766 AC012182.1-201ENST00000570133 895 ntBASIC3.98□□□□□ -1.77
HMGXB3Q12766 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGXB3Q12766 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HMGXB3Q12766 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HMGXB3Q12766 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HMGXB3Q12766 Y_RNA.796-201ENST00000364268 102 ntBASIC3.97□□□□□ -1.77
HMGXB3Q12766 Y_RNA.799-201ENST00000364992 102 ntBASIC3.97□□□□□ -1.77
HMGXB3Q12766 MIR1287-201ENST00000408492 90 ntBASIC3.97□□□□□ -1.77
HMGXB3Q12766 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGXB3Q12766 CACYBPP1-201ENST00000438592 684 ntBASIC3.97□□□□□ -1.77
HMGXB3Q12766 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGXB3Q12766 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGXB3Q12766 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGXB3Q12766 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGXB3Q12766 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGXB3Q12766 AC091152.2-201ENST00000591628 2569 ntBASIC3.97□□□□□ -1.77
HMGXB3Q12766 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.97□□□□□ -1.77
HMGXB3Q12766 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.96□□□□□ -1.78
HMGXB3Q12766 MIR221-201ENST00000385135 110 ntBASIC3.96□□□□□ -1.78
HMGXB3Q12766 RNU6-321P-201ENST00000410912 106 ntBASIC3.96□□□□□ -1.78
HMGXB3Q12766 Z82205.1-201ENST00000428456 297 ntBASIC3.96□□□□□ -1.78
HMGXB3Q12766 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.96□□□□□ -1.78
HMGXB3Q12766 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.96□□□□□ -1.78
HMGXB3Q12766 RPL21P71-201ENST00000465598 459 ntBASIC3.96□□□□□ -1.78
HMGXB3Q12766 AC068339.2-201ENST00000534395 618 ntBASIC3.96□□□□□ -1.78
HMGXB3Q12766 AC011494.1-201ENST00000596454 237 ntBASIC3.96□□□□□ -1.78
HMGXB3Q12766 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.96□□□□□ -1.78
HMGXB3Q12766 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.96□□□□□ -1.78
HMGXB3Q12766 SNORD21-201ENST00000383953 95 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 RNA5SP129-201ENST00000410276 118 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.95□□□□□ -1.78
HMGXB3Q12766 AL513175.2-201ENST00000422071 443 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 SCARNA17.1-201ENST00000516211 143 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 SCARNA17.2-201ENST00000516334 143 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 AC107871.2-201ENST00000612894 502 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 SCARNA17.4-201ENST00000614296 143 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 AC009831.4-201ENST00000620744 325 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGXB3Q12766 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGXB3Q12766 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGXB3Q12766 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.95□□□□□ -1.78
HMGXB3Q12766 AC093010.3-201ENST00000570269 15214 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGXB3Q12766 MIR1183-201ENST00000408856 89 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 IPMKP1-201ENST00000425988 855 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 AC010198.2-201ENST00000550612 259 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 AC105137.2-201ENST00000569073 466 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 AL139286.1-201ENST00000604465 483 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 AP003117.2-201ENST00000606010 545 ntBASIC3.95□□□□□ -1.78
HMGXB3Q12766 AL445437.1-201ENST00000623157 3087 ntBASIC3.94□□□□□ -1.78
HMGXB3Q12766 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGXB3Q12766 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
HMGXB3Q12766 RNA5SP213-201ENST00000391031 106 ntBASIC3.94□□□□□ -1.78
HMGXB3Q12766 RNU2-6P-201ENST00000411404 190 ntBASIC3.94□□□□□ -1.78
HMGXB3Q12766 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGXB3Q12766 RPS15AP28-201ENST00000435088 386 ntBASIC3.94□□□□□ -1.78
HMGXB3Q12766 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGXB3Q12766 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGXB3Q12766 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms