Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCNA1P78396 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCNA1P78396 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.58□□□□□ -1.84
CCNA1P78396 RNA5SP27-201ENST00000363839 119 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 RNU6-444P-201ENST00000383988 108 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 RPL7P25-201ENST00000404151 721 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 AL583834.1-201ENST00000406943 343 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 RNA5SP56-201ENST00000410277 118 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNA1P78396 PNRC2P1-201ENST00000423940 420 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNA1P78396 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCNA1P78396 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNA1P78396 ETF1P3-201ENST00000430422 1160 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNA1P78396 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCNA1P78396 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.58□□□□□ -1.84
CCNA1P78396 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNA1P78396 AC007000.2-201ENST00000442564 487 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 AC016696.1-201ENST00000446949 318 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.58□□□□□ -1.84
CCNA1P78396 HMGN3P1-201ENST00000453847 193 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.58□□□□□ -1.84
CCNA1P78396 OR2A20P-203ENST00000498397 1268 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.58□□□□□ -1.84
CCNA1P78396 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNA1P78396 SNORA31.20-201ENST00000517111 133 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 AP005205.1-201ENST00000563503 508 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 CYP2C60P-201ENST00000566088 139 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 ATP5F1P7-201ENST00000567330 760 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.58□□□□□ -1.84
CCNA1P78396 AL669831.4-202ENST00000590817 238 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 AC016877.3-201ENST00000606778 504 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 AL355802.4-201ENST00000607635 548 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 AC092650.2-201ENST00000619984 902 ntBASIC3.58□□□□□ -1.84
CCNA1P78396 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.58□□□□□ -1.84
CCNA1P78396 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.58□□□□□ -1.84
CCNA1P78396 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCNA1P78396 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.58□□□□□ -1.84
CCNA1P78396 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNA1P78396 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.58□□□□□ -1.84
CCNA1P78396 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCNA1P78396 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.57□□□□□ -1.84
CCNA1P78396 SNORA54-201ENST00000384281 123 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 RNU6-883P-201ENST00000384597 107 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCNA1P78396 EI24P2-201ENST00000397776 1076 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 EEF1A1P41-201ENST00000414667 207 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 RAD23BP2-201ENST00000416003 1207 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 AC127526.1-201ENST00000417526 366 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 AL139281.1-201ENST00000422120 335 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.57□□□□□ -1.84
CCNA1P78396 AC108734.1-201ENST00000439549 399 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 MTND1P33-201ENST00000446251 917 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 HMGB3P8-201ENST00000449709 577 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 BX248409.1-201ENST00000455497 255 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 RNU6-775P-201ENST00000459318 96 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 AC004801.2-202ENST00000463559 283 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.57□□□□□ -1.84
CCNA1P78396 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.57□□□□□ -1.84
CCNA1P78396 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.57□□□□□ -1.84
CCNA1P78396 RNU6-1231P-201ENST00000517185 103 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.57□□□□□ -1.84
CCNA1P78396 OR4A45P-201ENST00000529954 901 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.57□□□□□ -1.84
CCNA1P78396 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCNA1P78396 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.57□□□□□ -1.84
CCNA1P78396 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCNA1P78396 MIR4672-201ENST00000583126 81 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.57□□□□□ -1.84
CCNA1P78396 AC013468.1-201ENST00000608680 598 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.57□□□□□ -1.84
CCNA1P78396 AP001033.2-201ENST00000609701 1003 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 AC100793.4-201ENST00000613683 429 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 AL162574.2-201ENST00000614618 657 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 AC009487.2-201ENST00000420969 6821 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 AC004944.1-201ENST00000517807 3059 ntBASIC3.57□□□□□ -1.84
CCNA1P78396 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCNA1P78396 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCNA1P78396 MIR22-201ENST00000362190 85 ntBASIC3.56□□□□□ -1.84
CCNA1P78396 RNU6-1226P-201ENST00000384317 107 ntBASIC3.56□□□□□ -1.84
CCNA1P78396 Y_RNA.493-201ENST00000384422 102 ntBASIC3.56□□□□□ -1.84
CCNA1P78396 RPS3AP26-201ENST00000398259 784 ntBASIC3.56□□□□□ -1.84
CCNA1P78396 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.56□□□□□ -1.84
CCNA1P78396 HIGD1AP11-201ENST00000438361 280 ntBASIC3.56□□□□□ -1.84
CCNA1P78396 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.56□□□□□ -1.84
CCNA1P78396 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.56□□□□□ -1.84
CCNA1P78396 snoU13.4-201ENST00000458916 104 ntBASIC3.56□□□□□ -1.84
CCNA1P78396 RPS4XP22-201ENST00000480755 780 ntBASIC3.56□□□□□ -1.84
CCNA1P78396 RPL23AP44-201ENST00000482216 473 ntBASIC3.56□□□□□ -1.84
CCNA1P78396 MTCYBP37-201ENST00000510642 1133 ntBASIC3.56□□□□□ -1.84
CCNA1P78396 RNU6-202P-201ENST00000515998 96 ntBASIC3.56□□□□□ -1.84
CCNA1P78396 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.56□□□□□ -1.84
CCNA1P78396 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.56□□□□□ -1.84
CCNA1P78396 AC019227.1-201ENST00000526902 510 ntBASIC3.56□□□□□ -1.84
CCNA1P78396 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.56□□□□□ -1.84
CCNA1P78396 OR8K4P-201ENST00000534608 872 ntBASIC3.56□□□□□ -1.84
CCNA1P78396 TGIF1P1-201ENST00000558095 802 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms