Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AP000907.2-201ENST00000530827 353 ntBASIC4.98□□□□□ -1.61
YBX1P67809 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.98□□□□□ -1.61
YBX1P67809 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.98□□□□□ -1.61
YBX1P67809 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.98□□□□□ -1.61
YBX1P67809 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.98□□□□□ -1.61
YBX1P67809 HMGN2P6-201ENST00000551091 273 ntBASIC4.98□□□□□ -1.61
YBX1P67809 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.98□□□□□ -1.61
YBX1P67809 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.98□□□□□ -1.61
YBX1P67809 VN1R107P-201ENST00000601784 209 ntBASIC4.98□□□□□ -1.61
YBX1P67809 7SK.7-201ENST00000603504 247 ntBASIC4.98□□□□□ -1.61
YBX1P67809 AL355598.1-201ENST00000604169 202 ntBASIC4.98□□□□□ -1.61
YBX1P67809 APOOP1-201ENST00000604695 592 ntBASIC4.98□□□□□ -1.61
YBX1P67809 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.98□□□□□ -1.61
YBX1P67809 AC004908.2-201ENST00000609090 574 ntBASIC4.98□□□□□ -1.61
YBX1P67809 Mico1.1-201ENST00000611698 204 ntBASIC4.98□□□□□ -1.61
YBX1P67809 AC130324.3-201ENST00000614165 542 ntBASIC4.98□□□□□ -1.61
YBX1P67809 AC068870.2-201ENST00000620635 389 ntBASIC4.98□□□□□ -1.61
YBX1P67809 AC015908.5-201ENST00000623289 343 ntBASIC4.98□□□□□ -1.61
YBX1P67809 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.98□□□□□ -1.61
YBX1P67809 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.98□□□□□ -1.61
YBX1P67809 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.98□□□□□ -1.61
YBX1P67809 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.98□□□□□ -1.61
YBX1P67809 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.98□□□□□ -1.61
YBX1P67809 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
YBX1P67809 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
YBX1P67809 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
YBX1P67809 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
YBX1P67809 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
YBX1P67809 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
YBX1P67809 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.97□□□□□ -1.61
YBX1P67809 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.97□□□□□ -1.61
YBX1P67809 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.97□□□□□ -1.61
YBX1P67809 AL161781.1-201ENST00000354277 403 ntBASIC4.97□□□□□ -1.61
YBX1P67809 RN7SKP44-201ENST00000363602 316 ntBASIC4.97□□□□□ -1.61
YBX1P67809 RN7SKP153-201ENST00000365026 316 ntBASIC4.97□□□□□ -1.61
YBX1P67809 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
YBX1P67809 RNU1-74P-201ENST00000384108 171 ntBASIC4.97□□□□□ -1.61
YBX1P67809 RNU6-921P-201ENST00000384361 107 ntBASIC4.97□□□□□ -1.61
YBX1P67809 MIR550A3-201ENST00000390735 95 ntBASIC4.97□□□□□ -1.61
YBX1P67809 RNU6-308P-201ENST00000390957 107 ntBASIC4.97□□□□□ -1.61
YBX1P67809 AC016769.3-201ENST00000396562 315 ntBASIC4.97□□□□□ -1.61
YBX1P67809 RPL7P60-201ENST00000397636 735 ntBASIC4.97□□□□□ -1.61
YBX1P67809 MTCYBP4-201ENST00000401524 249 ntBASIC4.97□□□□□ -1.61
YBX1P67809 U3.36-201ENST00000408418 213 ntBASIC4.97□□□□□ -1.61
YBX1P67809 RNU6-1304P-201ENST00000411374 106 ntBASIC4.97□□□□□ -1.61
YBX1P67809 RPL36AP36-201ENST00000418616 301 ntBASIC4.97□□□□□ -1.61
YBX1P67809 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
YBX1P67809 AC137499.1-201ENST00000427602 88 ntBASIC4.97□□□□□ -1.61
YBX1P67809 RPL37P1-201ENST00000432310 284 ntBASIC4.97□□□□□ -1.61
YBX1P67809 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.97□□□□□ -1.61
YBX1P67809 RHOT1P3-201ENST00000436571 331 ntBASIC4.97□□□□□ -1.61
YBX1P67809 ARL2BPP10-201ENST00000446487 531 ntBASIC4.97□□□□□ -1.61
YBX1P67809 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
YBX1P67809 RPL21P99-201ENST00000480369 423 ntBASIC4.97□□□□□ -1.61
YBX1P67809 AC022133.1-201ENST00000490961 571 ntBASIC4.97□□□□□ -1.61
YBX1P67809 CEACAMP10-202ENST00000495431 496 ntBASIC4.97□□□□□ -1.61
YBX1P67809 MTCO1P29-201ENST00000496868 288 ntBASIC4.97□□□□□ -1.61
YBX1P67809 RPS24P16-201ENST00000497294 392 ntBASIC4.97□□□□□ -1.61
YBX1P67809 AC017037.1-201ENST00000508460 471 ntBASIC4.97□□□□□ -1.61
YBX1P67809 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.97□□□□□ -1.61
YBX1P67809 RNA5SP228-201ENST00000516232 133 ntBASIC4.97□□□□□ -1.61
YBX1P67809 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
YBX1P67809 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.97□□□□□ -1.61
YBX1P67809 COX6CP5-201ENST00000527162 228 ntBASIC4.97□□□□□ -1.61
YBX1P67809 OR5D15P-201ENST00000531671 942 ntBASIC4.97□□□□□ -1.61
YBX1P67809 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.97□□□□□ -1.61
YBX1P67809 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
YBX1P67809 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.97□□□□□ -1.61
YBX1P67809 MIR4503-201ENST00000582187 83 ntBASIC4.97□□□□□ -1.61
YBX1P67809 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.97□□□□□ -1.61
YBX1P67809 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
YBX1P67809 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.97□□□□□ -1.61
YBX1P67809 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.97□□□□□ -1.61
YBX1P67809 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.97□□□□□ -1.61
YBX1P67809 AC010680.4-201ENST00000605334 543 ntBASIC4.97□□□□□ -1.61
YBX1P67809 CTHRC1P1-201ENST00000605383 469 ntBASIC4.97□□□□□ -1.61
YBX1P67809 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.97□□□□□ -1.61
YBX1P67809 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
YBX1P67809 AL359757.2-201ENST00000624309 274 ntBASIC4.97□□□□□ -1.61
YBX1P67809 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.97□□□□□ -1.61
YBX1P67809 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.97□□□□□ -1.61
YBX1P67809 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
YBX1P67809 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.97□□□□□ -1.61
YBX1P67809 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
YBX1P67809 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.97□□□□□ -1.61
YBX1P67809 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.97□□□□□ -1.61
YBX1P67809 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.97□□□□□ -1.61
YBX1P67809 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
YBX1P67809 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
YBX1P67809 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.96□□□□□ -1.61
YBX1P67809 AC063976.2-201ENST00000425667 3556 ntBASIC4.96□□□□□ -1.61
YBX1P67809 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.96□□□□□ -1.61
YBX1P67809 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
YBX1P67809 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.96□□□□□ -1.62
YBX1P67809 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
YBX1P67809 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
YBX1P67809 AC067945.1-201ENST00000342609 618 ntBASIC4.96□□□□□ -1.62
YBX1P67809 Y_RNA.197-201ENST00000364004 102 ntBASIC4.96□□□□□ -1.62
YBX1P67809 RNU6-1318P-201ENST00000365389 103 ntBASIC4.96□□□□□ -1.62
YBX1P67809 RNU4-48P-201ENST00000365559 182 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms