Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
LMO4P61968 MAPK10-349ENST00000641767 3661 ntBASIC3.28□□□□□ -1.88
LMO4P61968 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LMO4P61968 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
LMO4P61968 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LMO4P61968 HMGB1P5-201ENST00000255320 642 ntBASIC3.28□□□□□ -1.88
LMO4P61968 SNORA4.1-201ENST00000364263 144 ntBASIC3.28□□□□□ -1.88
LMO4P61968 Y_RNA.311-201ENST00000365068 96 ntBASIC3.28□□□□□ -1.88
LMO4P61968 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.28□□□□□ -1.88
LMO4P61968 RNU6-356P-201ENST00000384140 107 ntBASIC3.28□□□□□ -1.88
LMO4P61968 RAP1BP3-201ENST00000407180 549 ntBASIC3.28□□□□□ -1.88
LMO4P61968 RN7SKP156-201ENST00000410308 342 ntBASIC3.28□□□□□ -1.88
LMO4P61968 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.28□□□□□ -1.88
LMO4P61968 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.28□□□□□ -1.88
LMO4P61968 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LMO4P61968 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LMO4P61968 AC008280.1-201ENST00000418851 412 ntBASIC3.28□□□□□ -1.88
LMO4P61968 Z97055.1-201ENST00000419730 712 ntBASIC3.28□□□□□ -1.88
LMO4P61968 OR51AB1P-201ENST00000429046 620 ntBASIC3.28□□□□□ -1.88
LMO4P61968 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.28□□□□□ -1.88
LMO4P61968 SEPT7P5-201ENST00000434048 306 ntBASIC3.28□□□□□ -1.88
LMO4P61968 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.28□□□□□ -1.88
LMO4P61968 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.28□□□□□ -1.88
LMO4P61968 NOTCH2P1-201ENST00000443481 624 ntBASIC3.28□□□□□ -1.88
LMO4P61968 VN1R34P-201ENST00000447387 883 ntBASIC3.28□□□□□ -1.88
LMO4P61968 RPL36AP33-201ENST00000450395 310 ntBASIC3.28□□□□□ -1.88
LMO4P61968 PPIAP3-201ENST00000450588 505 ntBASIC3.28□□□□□ -1.88
LMO4P61968 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.28□□□□□ -1.88
LMO4P61968 AC091564.1-201ENST00000464563 479 ntBASIC3.28□□□□□ -1.88
LMO4P61968 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
LMO4P61968 AC116337.2-201ENST00000477662 156 ntBASIC3.28□□□□□ -1.88
LMO4P61968 PPIAP15-201ENST00000479662 484 ntBASIC3.28□□□□□ -1.88
LMO4P61968 AC006517.1-201ENST00000480485 328 ntBASIC3.28□□□□□ -1.88
LMO4P61968 AC096751.1-202ENST00000502691 1067 ntBASIC3.28□□□□□ -1.88
LMO4P61968 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.28□□□□□ -1.88
LMO4P61968 AC021146.3-201ENST00000511911 260 ntBASIC3.28□□□□□ -1.88
LMO4P61968 FABP5P5-201ENST00000515537 406 ntBASIC3.28□□□□□ -1.88
LMO4P61968 RNU6-1225P-201ENST00000516336 65 ntBASIC3.28□□□□□ -1.88
LMO4P61968 RNU6-352P-201ENST00000516908 107 ntBASIC3.28□□□□□ -1.88
LMO4P61968 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.28□□□□□ -1.88
LMO4P61968 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.28□□□□□ -1.88
LMO4P61968 AC087883.1-201ENST00000551882 391 ntBASIC3.28□□□□□ -1.88
LMO4P61968 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LMO4P61968 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.28□□□□□ -1.88
LMO4P61968 AC022968.1-201ENST00000567372 442 ntBASIC3.28□□□□□ -1.88
LMO4P61968 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.28□□□□□ -1.88
LMO4P61968 AL390816.3-201ENST00000604527 1066 ntBASIC3.28□□□□□ -1.88
LMO4P61968 AC112220.3-201ENST00000605502 502 ntBASIC3.28□□□□□ -1.88
LMO4P61968 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.28□□□□□ -1.88
LMO4P61968 AL121772.2-201ENST00000614331 297 ntBASIC3.28□□□□□ -1.88
LMO4P61968 AC013476.2-201ENST00000614456 459 ntBASIC3.28□□□□□ -1.88
LMO4P61968 MIR7844-201ENST00000616161 122 ntBASIC3.28□□□□□ -1.88
LMO4P61968 LINC00901.1-201ENST00000617252 152 ntBASIC3.28□□□□□ -1.88
LMO4P61968 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.28□□□□□ -1.88
LMO4P61968 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LMO4P61968 AC012442.3-202ENST00000636742 206 ntBASIC3.28□□□□□ -1.88
LMO4P61968 AC099063.3-201ENST00000642066 185 ntBASIC3.28□□□□□ -1.88
LMO4P61968 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.28□□□□□ -1.88
LMO4P61968 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
LMO4P61968 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.28□□□□□ -1.89
LMO4P61968 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
LMO4P61968 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.27□□□□□ -1.89
LMO4P61968 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LMO4P61968 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.27□□□□□ -1.89
LMO4P61968 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
LMO4P61968 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.27□□□□□ -1.89
LMO4P61968 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LMO4P61968 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LMO4P61968 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LMO4P61968 OR4A15-201ENST00000314706 1035 ntBASIC3.27□□□□□ -1.89
LMO4P61968 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.27□□□□□ -1.89
LMO4P61968 Y_RNA.18-201ENST00000362461 102 ntBASIC3.27□□□□□ -1.89
LMO4P61968 RNU6-867P-201ENST00000364956 107 ntBASIC3.27□□□□□ -1.89
LMO4P61968 RNA5SP97-201ENST00000365006 84 ntBASIC3.27□□□□□ -1.89
LMO4P61968 MIR200C-201ENST00000384980 68 ntBASIC3.27□□□□□ -1.89
LMO4P61968 MIR670-201ENST00000390142 98 ntBASIC3.27□□□□□ -1.89
LMO4P61968 BTBD10P2-201ENST00000404779 676 ntBASIC3.27□□□□□ -1.89
LMO4P61968 ZNF603P-201ENST00000405613 487 ntBASIC3.27□□□□□ -1.89
LMO4P61968 SNORA3.3-201ENST00000408712 125 ntBASIC3.27□□□□□ -1.89
LMO4P61968 RNU2-66P-201ENST00000410650 161 ntBASIC3.27□□□□□ -1.89
LMO4P61968 SNORA57.3-201ENST00000411095 141 ntBASIC3.27□□□□□ -1.89
LMO4P61968 PIGPP2-201ENST00000411569 458 ntBASIC3.27□□□□□ -1.89
LMO4P61968 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.27□□□□□ -1.89
LMO4P61968 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.27□□□□□ -1.89
LMO4P61968 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LMO4P61968 AC104651.1-201ENST00000427559 735 ntBASIC3.27□□□□□ -1.89
LMO4P61968 RPL36P19-201ENST00000430744 301 ntBASIC3.27□□□□□ -1.89
LMO4P61968 GOT2P5-201ENST00000433995 546 ntBASIC3.27□□□□□ -1.89
LMO4P61968 RBMX2P4-201ENST00000441256 376 ntBASIC3.27□□□□□ -1.89
LMO4P61968 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.27□□□□□ -1.89
LMO4P61968 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.27□□□□□ -1.89
LMO4P61968 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.27□□□□□ -1.89
LMO4P61968 ST13P20-201ENST00000447996 1065 ntBASIC3.27□□□□□ -1.89
LMO4P61968 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.27□□□□□ -1.89
LMO4P61968 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.27□□□□□ -1.89
LMO4P61968 HMGN3P1-201ENST00000453847 193 ntBASIC3.27□□□□□ -1.89
LMO4P61968 RN7SL585P-201ENST00000470538 280 ntBASIC3.27□□□□□ -1.89
LMO4P61968 AC087879.1-201ENST00000474343 374 ntBASIC3.27□□□□□ -1.89
LMO4P61968 VPS26AP1-201ENST00000483197 979 ntBASIC3.27□□□□□ -1.89
LMO4P61968 AC012170.1-201ENST00000495139 359 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms