Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.75□□□□□ -1.65
RHBDL3P58872 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.75□□□□□ -1.65
RHBDL3P58872 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RHBDL3P58872 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RHBDL3P58872 RNU6-50P-201ENST00000362356 103 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 SNORA62.3-201ENST00000365110 153 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 U8.11-201ENST00000384699 133 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 U8.12-201ENST00000384701 133 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 RNU6-253P-201ENST00000384730 105 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 PTMAP2-201ENST00000397627 327 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 RNU6ATAC-201ENST00000408749 126 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.75□□□□□ -1.65
RHBDL3P58872 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.75□□□□□ -1.65
RHBDL3P58872 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.75□□□□□ -1.65
RHBDL3P58872 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.75□□□□□ -1.65
RHBDL3P58872 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RHBDL3P58872 CYCSP43-201ENST00000438233 310 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 AC002381.1-201ENST00000447049 280 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 AL133547.1-201ENST00000448546 220 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 AL353691.1-201ENST00000451332 387 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 FABP3P2-201ENST00000453169 399 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 AC005008.1-201ENST00000456151 612 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 U8.18-201ENST00000459285 133 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 RPL9P32-201ENST00000464118 620 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
RHBDL3P58872 AC147055.4-201ENST00000504399 745 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.75□□□□□ -1.65
RHBDL3P58872 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.75□□□□□ -1.65
RHBDL3P58872 AC021146.1-201ENST00000511202 716 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
RHBDL3P58872 RN7SKP244-201ENST00000516513 307 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 RNA5SP143-201ENST00000516936 115 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 Y_RNA.717-201ENST00000517106 92 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.75□□□□□ -1.65
RHBDL3P58872 AC103783.1-201ENST00000520506 373 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.75□□□□□ -1.65
RHBDL3P58872 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.75□□□□□ -1.65
RHBDL3P58872 AC022968.1-201ENST00000567372 442 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 AL353997.4-201ENST00000586196 166 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 AC006254.3-201ENST00000603353 884 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 AL163642.2-201ENST00000604722 1019 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 AC090186.1-201ENST00000605991 572 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 AC090425.2-201ENST00000608818 501 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.75□□□□□ -1.65
RHBDL3P58872 CR392039.5-201ENST00000623201 510 ntBASIC4.75□□□□□ -1.65
RHBDL3P58872 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.75□□□□□ -1.65
RHBDL3P58872 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.75□□□□□ -1.65
RHBDL3P58872 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RHBDL3P58872 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.75□□□□□ -1.65
RHBDL3P58872 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RHBDL3P58872 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.74□□□□□ -1.65
RHBDL3P58872 RNU6-1155P-201ENST00000363554 107 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 RNU6-173P-201ENST00000364215 104 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 SNORA73.2-201ENST00000364946 201 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 MIR670-201ENST00000390142 98 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 MIR320C1-201ENST00000408566 88 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.74□□□□□ -1.65
RHBDL3P58872 RAB9AP3-201ENST00000412737 573 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 CCDC58P2-201ENST00000417131 366 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 BEND7P1-201ENST00000422058 457 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 DUTP6-201ENST00000425573 462 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.74□□□□□ -1.65
RHBDL3P58872 RAB9AP1-201ENST00000449393 573 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 AC034236.1-201ENST00000469891 373 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 RN7SL323P-201ENST00000494712 295 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 AL139099.1-201ENST00000497398 403 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.74□□□□□ -1.65
RHBDL3P58872 SCARNA14-201ENST00000516903 136 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 AC087369.1-201ENST00000520775 996 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.74□□□□□ -1.65
RHBDL3P58872 AC023538.1-201ENST00000534576 736 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RHBDL3P58872 AC090888.2-201ENST00000559765 1144 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 ZNF192P1-203ENST00000565888 810 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.74□□□□□ -1.65
RHBDL3P58872 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.74□□□□□ -1.65
RHBDL3P58872 BNIP3P22-201ENST00000593399 556 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 AC020914.6-201ENST00000594327 272 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.74□□□□□ -1.65
RHBDL3P58872 AC015726.1-201ENST00000602353 681 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 VIS1.1-201ENST00000610517 203 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RHBDL3P58872 AC015967.1-201ENST00000619893 476 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RHBDL3P58872 AC073530.2-201ENST00000623987 261 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.74□□□□□ -1.65
RHBDL3P58872 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.74□□□□□ -1.65
RHBDL3P58872 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
RHBDL3P58872 GABPAP-201ENST00000419271 1356 ntBASIC4.74□□□□□ -1.65
RHBDL3P58872 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RHBDL3P58872 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RHBDL3P58872 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RHBDL3P58872 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.73□□□□□ -1.65
RHBDL3P58872 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RHBDL3P58872 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.73□□□□□ -1.65
RHBDL3P58872 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RHBDL3P58872 AC087359.1-201ENST00000508335 1740 ntBASIC4.73□□□□□ -1.65
RHBDL3P58872 SNORA71.3-201ENST00000362582 128 ntBASIC4.73□□□□□ -1.65
RHBDL3P58872 RNU6-359P-201ENST00000365466 108 ntBASIC4.73□□□□□ -1.65
RHBDL3P58872 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms