Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 AL390208.1-201ENST00000605885 644 ntBASIC3.3□□□□□ -1.88
PAX9P55771 AC103710.3-201ENST00000608157 948 ntBASIC3.3□□□□□ -1.88
PAX9P55771 AL158063.1-201ENST00000615349 536 ntBASIC3.3□□□□□ -1.88
PAX9P55771 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PAX9P55771 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PAX9P55771 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.3□□□□□ -1.88
PAX9P55771 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
PAX9P55771 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PAX9P55771 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.3□□□□□ -1.88
PAX9P55771 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.29□□□□□ -1.88
PAX9P55771 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PAX9P55771 RAD17P1-201ENST00000418130 2042 ntBASIC3.29□□□□□ -1.88
PAX9P55771 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PAX9P55771 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.29□□□□□ -1.88
PAX9P55771 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
PAX9P55771 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PAX9P55771 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PAX9P55771 OR11H4-201ENST00000315409 1082 ntBASIC3.29□□□□□ -1.88
PAX9P55771 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PAX9P55771 RNU1-18P-201ENST00000363062 164 ntBASIC3.29□□□□□ -1.88
PAX9P55771 Y_RNA.97-201ENST00000363094 102 ntBASIC3.29□□□□□ -1.88
PAX9P55771 RNVU1-3-201ENST00000364313 161 ntBASIC3.29□□□□□ -1.88
PAX9P55771 Y_RNA.493-201ENST00000384422 102 ntBASIC3.29□□□□□ -1.88
PAX9P55771 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
PAX9P55771 RNA5SP36-201ENST00000410197 133 ntBASIC3.29□□□□□ -1.88
PAX9P55771 RN7SKP182-201ENST00000410772 298 ntBASIC3.29□□□□□ -1.88
PAX9P55771 BTF3L4P1-201ENST00000413813 468 ntBASIC3.29□□□□□ -1.88
PAX9P55771 HMGB1P11-201ENST00000413899 637 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PAX9P55771 RPL31P45-201ENST00000419532 356 ntBASIC3.29□□□□□ -1.88
PAX9P55771 MTCYBP24-201ENST00000420387 1106 ntBASIC3.29□□□□□ -1.88
PAX9P55771 CYCSP46-201ENST00000423569 204 ntBASIC3.29□□□□□ -1.88
PAX9P55771 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.29□□□□□ -1.88
PAX9P55771 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.29□□□□□ -1.88
PAX9P55771 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.29□□□□□ -1.88
PAX9P55771 AL590233.1-201ENST00000430017 456 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AL365184.2-201ENST00000431139 435 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AC010153.1-201ENST00000432862 727 ntBASIC3.29□□□□□ -1.88
PAX9P55771 CKS1BP5-201ENST00000434172 273 ntBASIC3.29□□□□□ -1.88
PAX9P55771 MTCYBP45-201ENST00000435243 565 ntBASIC3.29□□□□□ -1.88
PAX9P55771 RSU1P2-202ENST00000437884 485 ntBASIC3.29□□□□□ -1.88
PAX9P55771 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.29□□□□□ -1.88
PAX9P55771 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.29□□□□□ -1.88
PAX9P55771 HSPE1P28-201ENST00000443139 211 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.29□□□□□ -1.88
PAX9P55771 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.29□□□□□ -1.88
PAX9P55771 AL360221.1-201ENST00000445989 335 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AP000936.2-201ENST00000447151 681 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.29□□□□□ -1.88
PAX9P55771 AL445669.2-201ENST00000454425 421 ntBASIC3.29□□□□□ -1.88
PAX9P55771 RPL36AP13-201ENST00000457490 317 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.29□□□□□ -1.88
PAX9P55771 RNU7-170P-201ENST00000459303 61 ntBASIC3.29□□□□□ -1.88
PAX9P55771 RPL9P32-201ENST00000464118 620 ntBASIC3.29□□□□□ -1.88
PAX9P55771 MTND4LP3-201ENST00000468320 276 ntBASIC3.29□□□□□ -1.88
PAX9P55771 RPL21P103-201ENST00000479921 488 ntBASIC3.29□□□□□ -1.88
PAX9P55771 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.29□□□□□ -1.88
PAX9P55771 RPL7P47-201ENST00000497299 556 ntBASIC3.29□□□□□ -1.88
PAX9P55771 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.29□□□□□ -1.88
PAX9P55771 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.29□□□□□ -1.88
PAX9P55771 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
PAX9P55771 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.29□□□□□ -1.88
PAX9P55771 AC026726.1-201ENST00000512859 601 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.29□□□□□ -1.88
PAX9P55771 AC093677.1-201ENST00000514414 678 ntBASIC3.29□□□□□ -1.88
PAX9P55771 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.29□□□□□ -1.88
PAX9P55771 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.29□□□□□ -1.88
PAX9P55771 AC013828.2-201ENST00000532487 235 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.29□□□□□ -1.88
PAX9P55771 AC024224.1-201ENST00000538284 609 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.29□□□□□ -1.88
PAX9P55771 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.29□□□□□ -1.88
PAX9P55771 AC022968.1-201ENST00000567372 442 ntBASIC3.29□□□□□ -1.88
PAX9P55771 MIR5186-201ENST00000577504 120 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AC012417.1-201ENST00000582307 1039 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.29□□□□□ -1.88
PAX9P55771 BBIP1P1-201ENST00000602999 279 ntBASIC3.29□□□□□ -1.88
PAX9P55771 U73023.1-201ENST00000603134 700 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AP000403.1-201ENST00000603349 851 ntBASIC3.29□□□□□ -1.88
PAX9P55771 BCRP9-201ENST00000605312 388 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AC090186.1-201ENST00000605991 572 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AC012409.3-201ENST00000611343 981 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AL357080.1-201ENST00000617394 239 ntBASIC3.29□□□□□ -1.88
PAX9P55771 AC006065.5-201ENST00000623427 349 ntBASIC3.29□□□□□ -1.88
PAX9P55771 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.29□□□□□ -1.88
PAX9P55771 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PAX9P55771 UBE3AP2-201ENST00000429033 2259 ntBASIC3.29□□□□□ -1.88
PAX9P55771 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PAX9P55771 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PAX9P55771 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
PAX9P55771 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PAX9P55771 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PAX9P55771 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PAX9P55771 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.29□□□□□ -1.88
PAX9P55771 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PAX9P55771 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.28□□□□□ -1.88
PAX9P55771 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PAX9P55771 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PAX9P55771 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.28□□□□□ -1.88
PAX9P55771 AL390237.1-201ENST00000404226 1415 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms