Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RAD23BP54727 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RAD23BP54727 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
RAD23BP54727 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RAD23BP54727 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RAD23BP54727 Y_RNA.18-201ENST00000362461 102 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.03□□□□□ -1.76
RAD23BP54727 AC016769.3-201ENST00000396562 315 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AL121972.1-201ENST00000402023 252 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AL356967.1-201ENST00000406305 431 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 RNU2-21P-201ENST00000410368 188 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.03□□□□□ -1.76
RAD23BP54727 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.03□□□□□ -1.76
RAD23BP54727 AC016907.1-201ENST00000419483 435 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.03□□□□□ -1.76
RAD23BP54727 AL139247.1-201ENST00000422768 325 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.03□□□□□ -1.76
RAD23BP54727 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.03□□□□□ -1.76
RAD23BP54727 AL117351.1-201ENST00000438864 766 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.03□□□□□ -1.76
RAD23BP54727 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RAD23BP54727 MTCO3P2-201ENST00000457365 171 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 RN7SL132P-201ENST00000478131 296 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.03□□□□□ -1.76
RAD23BP54727 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.03□□□□□ -1.76
RAD23BP54727 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.03□□□□□ -1.76
RAD23BP54727 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RAD23BP54727 LTV1P1-201ENST00000510683 1237 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AC021146.1-201ENST00000511202 716 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.03□□□□□ -1.76
RAD23BP54727 RNA5SP164-201ENST00000516533 110 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 RNU6-678P-201ENST00000516832 109 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.03□□□□□ -1.76
RAD23BP54727 SUMO2P20-201ENST00000520803 283 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.03□□□□□ -1.76
RAD23BP54727 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.03□□□□□ -1.76
RAD23BP54727 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.03□□□□□ -1.76
RAD23BP54727 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.03□□□□□ -1.76
RAD23BP54727 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.03□□□□□ -1.76
RAD23BP54727 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.03□□□□□ -1.76
RAD23BP54727 BNIP3P5-201ENST00000562290 498 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AC009101.1-201ENST00000568135 242 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AC002400.1-201ENST00000569310 726 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.03□□□□□ -1.76
RAD23BP54727 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.03□□□□□ -1.76
RAD23BP54727 AC004223.2-201ENST00000590309 544 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 DUXAP11-201ENST00000603858 526 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.03□□□□□ -1.76
RAD23BP54727 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.03□□□□□ -1.76
RAD23BP54727 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.03□□□□□ -1.76
RAD23BP54727 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
RAD23BP54727 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RAD23BP54727 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RAD23BP54727 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RAD23BP54727 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RAD23BP54727 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RAD23BP54727 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.03□□□□□ -1.76
RAD23BP54727 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
RAD23BP54727 ZNF37BP-203ENST00000452306 1352 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.02□□□□□ -1.77
RAD23BP54727 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.02□□□□□ -1.77
RAD23BP54727 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RAD23BP54727 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RAD23BP54727 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RAD23BP54727 RNU6-660P-201ENST00000364566 109 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RAD23BP54727 EIF5P1-201ENST00000400019 1231 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 CYCSP45-201ENST00000402289 315 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 SSXP10-201ENST00000402595 565 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 RN7SKP156-201ENST00000410308 342 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 RNU6-920P-201ENST00000410926 92 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.02□□□□□ -1.77
RAD23BP54727 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RAD23BP54727 AL035410.1-201ENST00000427409 427 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 AL591419.1-201ENST00000427423 339 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 BMS1P19-201ENST00000433925 393 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.02□□□□□ -1.77
RAD23BP54727 KATNBL1P3-201ENST00000443475 909 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 MTND2P4-201ENST00000445034 1004 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 RPL39P6-201ENST00000448289 150 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 AC092045.1-201ENST00000495716 1231 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 AC108078.3-201ENST00000502633 489 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.02□□□□□ -1.77
RAD23BP54727 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.02□□□□□ -1.77
RAD23BP54727 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.02□□□□□ -1.77
RAD23BP54727 PTP4A1P6-201ENST00000531034 478 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.02□□□□□ -1.77
RAD23BP54727 AC125611.1-201ENST00000549563 229 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.02□□□□□ -1.77
RAD23BP54727 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.02□□□□□ -1.77
RAD23BP54727 SULT1C2P1-202ENST00000562418 459 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.02□□□□□ -1.77
RAD23BP54727 PIGPP4-201ENST00000584447 307 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 AC110760.3-201ENST00000598794 467 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 AC025588.3-201ENST00000604182 274 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 AC069304.2-201ENST00000605154 435 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 AL451086.1-201ENST00000605596 223 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 AC080013.6-201ENST00000606185 215 ntBASIC4.02□□□□□ -1.77
RAD23BP54727 AC004223.4-201ENST00000612426 332 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms