Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.7□□□□□ -1.82
PDX1P52945 AC104986.1-201ENST00000517978 436 ntBASIC3.7□□□□□ -1.82
PDX1P52945 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.7□□□□□ -1.82
PDX1P52945 IGKV2-23-201ENST00000518729 323 ntBASIC3.7□□□□□ -1.82
PDX1P52945 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.7□□□□□ -1.82
PDX1P52945 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.7□□□□□ -1.82
PDX1P52945 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.7□□□□□ -1.82
PDX1P52945 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.7□□□□□ -1.82
PDX1P52945 CYCSP2-201ENST00000558168 301 ntBASIC3.7□□□□□ -1.82
PDX1P52945 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.7□□□□□ -1.82
PDX1P52945 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.7□□□□□ -1.82
PDX1P52945 MIR3200-201ENST00000580767 85 ntBASIC3.7□□□□□ -1.82
PDX1P52945 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.7□□□□□ -1.82
PDX1P52945 MIR5187-201ENST00000583479 76 ntBASIC3.7□□□□□ -1.82
PDX1P52945 AL354976.1-201ENST00000613843 387 ntBASIC3.7□□□□□ -1.82
PDX1P52945 AC090116.1-201ENST00000615679 446 ntBASIC3.7□□□□□ -1.82
PDX1P52945 AL591424.2-201ENST00000617023 128 ntBASIC3.7□□□□□ -1.82
PDX1P52945 MIR4496-201ENST00000635896 61 ntBASIC3.7□□□□□ -1.82
PDX1P52945 U6.101-201ENST00000637707 76 ntBASIC3.7□□□□□ -1.82
PDX1P52945 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.7□□□□□ -1.82
PDX1P52945 MTCO1P14-201ENST00000441695 1559 ntBASIC3.7□□□□□ -1.82
PDX1P52945 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDX1P52945 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDX1P52945 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDX1P52945 AP002907.1-201ENST00000606361 1430 ntBASIC3.7□□□□□ -1.82
PDX1P52945 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDX1P52945 OR5BR1P-201ENST00000524992 1330 ntBASIC3.7□□□□□ -1.82
PDX1P52945 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.69□□□□□ -1.82
PDX1P52945 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
PDX1P52945 MAPK10-373ENST00000641983 6772 ntBASIC3.69□□□□□ -1.82
PDX1P52945 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDX1P52945 AL390862.1-201ENST00000635467 1469 ntBASIC3.69□□□□□ -1.82
PDX1P52945 AL031985.3-201ENST00000565390 2449 ntBASIC3.69□□□□□ -1.82
PDX1P52945 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDX1P52945 ZNF37BP-203ENST00000452306 1352 ntBASIC3.69□□□□□ -1.82
PDX1P52945 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDX1P52945 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PDX1P52945 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.69□□□□□ -1.82
PDX1P52945 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDX1P52945 RNU6-1200P-201ENST00000384162 107 ntBASIC3.69□□□□□ -1.82
PDX1P52945 MIR34B-201ENST00000385076 84 ntBASIC3.69□□□□□ -1.82
PDX1P52945 MIR199A2-201ENST00000385289 110 ntBASIC3.69□□□□□ -1.82
PDX1P52945 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.69□□□□□ -1.82
PDX1P52945 AL590084.2-201ENST00000401481 382 ntBASIC3.69□□□□□ -1.82
PDX1P52945 RPS29P4-201ENST00000414733 161 ntBASIC3.69□□□□□ -1.82
PDX1P52945 AC098592.1-201ENST00000419352 333 ntBASIC3.69□□□□□ -1.82
PDX1P52945 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.69□□□□□ -1.82
PDX1P52945 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDX1P52945 AC096638.2-201ENST00000434965 711 ntBASIC3.69□□□□□ -1.82
PDX1P52945 MTCYBP34-201ENST00000439552 670 ntBASIC3.69□□□□□ -1.82
PDX1P52945 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.69□□□□□ -1.82
PDX1P52945 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.69□□□□□ -1.82
PDX1P52945 AC106707.2-201ENST00000484182 374 ntBASIC3.69□□□□□ -1.82
PDX1P52945 AC108078.3-201ENST00000502633 489 ntBASIC3.69□□□□□ -1.82
PDX1P52945 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
PDX1P52945 TMEM251P1-201ENST00000503717 318 ntBASIC3.69□□□□□ -1.82
PDX1P52945 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.69□□□□□ -1.82
PDX1P52945 AC093281.2-201ENST00000510153 597 ntBASIC3.69□□□□□ -1.82
PDX1P52945 XKRY-201ENST00000510392 1100 ntBASIC3.69□□□□□ -1.82
PDX1P52945 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.69□□□□□ -1.82
PDX1P52945 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.69□□□□□ -1.82
PDX1P52945 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.69□□□□□ -1.82
PDX1P52945 UBE2NP1-201ENST00000545592 458 ntBASIC3.69□□□□□ -1.82
PDX1P52945 ELOCP32-201ENST00000548625 324 ntBASIC3.69□□□□□ -1.82
PDX1P52945 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.69□□□□□ -1.82
PDX1P52945 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.69□□□□□ -1.82
PDX1P52945 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.69□□□□□ -1.82
PDX1P52945 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.69□□□□□ -1.82
PDX1P52945 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.69□□□□□ -1.82
PDX1P52945 MAGOH2P-202ENST00000584384 429 ntBASIC3.69□□□□□ -1.82
PDX1P52945 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.69□□□□□ -1.82
PDX1P52945 AC006539.2-201ENST00000601729 572 ntBASIC3.69□□□□□ -1.82
PDX1P52945 AC018638.7-201ENST00000605836 1114 ntBASIC3.69□□□□□ -1.82
PDX1P52945 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.69□□□□□ -1.82
PDX1P52945 AL136981.2-201ENST00000617319 734 ntBASIC3.69□□□□□ -1.82
PDX1P52945 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.69□□□□□ -1.82
PDX1P52945 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PDX1P52945 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDX1P52945 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PDX1P52945 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.69□□□□□ -1.82
PDX1P52945 LINC00561-201ENST00000565815 2738 ntBASIC3.69□□□□□ -1.82
PDX1P52945 AC018555.1-201ENST00000567548 1980 ntBASIC3.69□□□□□ -1.82
PDX1P52945 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDX1P52945 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDX1P52945 NMD3P1-201ENST00000439704 1488 ntBASIC3.68□□□□□ -1.82
PDX1P52945 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDX1P52945 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PDX1P52945 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PDX1P52945 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDX1P52945 RNA5SP51-201ENST00000364750 119 ntBASIC3.68□□□□□ -1.82
PDX1P52945 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.68□□□□□ -1.82
PDX1P52945 DHFRP6-201ENST00000401776 268 ntBASIC3.68□□□□□ -1.82
PDX1P52945 RPL7AP73-201ENST00000413490 353 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AC245052.5-201ENST00000416320 649 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AL391219.1-201ENST00000422570 483 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AL022400.1-201ENST00000423946 935 ntBASIC3.68□□□□□ -1.82
PDX1P52945 RPS6P12-201ENST00000432491 726 ntBASIC3.68□□□□□ -1.82
PDX1P52945 KCTD9P3-201ENST00000434597 1169 ntBASIC3.68□□□□□ -1.82
PDX1P52945 HSPD1P21-201ENST00000436541 245 ntBASIC3.68□□□□□ -1.82
PDX1P52945 AL591503.2-201ENST00000442314 1005 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms