Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 U2.11-201ENST00000616345 191 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 U2.2-201ENST00000616535 191 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 U2.3-201ENST00000617785 191 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 U2.19-201ENST00000618602 191 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 RNU2-1-201ENST00000618664 191 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 U2.6-201ENST00000619225 191 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 U2.5-201ENST00000619465 191 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 U2.10-201ENST00000620268 191 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.1□□□□□ -1.75
SMARCA4P51532 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.09□□□□□ -1.75
SMARCA4P51532 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.09□□□□□ -1.75
SMARCA4P51532 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.09□□□□□ -1.76
SMARCA4P51532 AC092427.1-202ENST00000430569 476 ntBASIC4.09□□□□□ -1.76
SMARCA4P51532 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SMARCA4P51532 NPM1P49-201ENST00000448027 714 ntBASIC4.09□□□□□ -1.76
SMARCA4P51532 AC091515.1-201ENST00000548110 679 ntBASIC4.09□□□□□ -1.76
SMARCA4P51532 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.09□□□□□ -1.76
SMARCA4P51532 MTCYBP28-201ENST00000566728 1132 ntBASIC4.09□□□□□ -1.76
SMARCA4P51532 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.09□□□□□ -1.76
SMARCA4P51532 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SMARCA4P51532 AC097714.1-201ENST00000511272 1647 ntBASIC4.08□□□□□ -1.76
SMARCA4P51532 Y_RNA.338-201ENST00000365320 114 ntBASIC4.08□□□□□ -1.76
SMARCA4P51532 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMARCA4P51532 MTATP6P11-201ENST00000428071 670 ntBASIC4.08□□□□□ -1.76
SMARCA4P51532 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.08□□□□□ -1.76
SMARCA4P51532 AL357520.1-201ENST00000441557 453 ntBASIC4.08□□□□□ -1.76
SMARCA4P51532 RPL36AP33-201ENST00000450395 310 ntBASIC4.08□□□□□ -1.76
SMARCA4P51532 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.08□□□□□ -1.76
SMARCA4P51532 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
SMARCA4P51532 HSPE1P18-201ENST00000517602 280 ntBASIC4.08□□□□□ -1.76
SMARCA4P51532 AC107918.3-201ENST00000533272 382 ntBASIC4.08□□□□□ -1.76
SMARCA4P51532 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.08□□□□□ -1.76
SMARCA4P51532 AC135628.1-201ENST00000568867 534 ntBASIC4.08□□□□□ -1.76
SMARCA4P51532 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.08□□□□□ -1.76
SMARCA4P51532 AC009487.2-201ENST00000420969 6821 ntBASIC4.08□□□□□ -1.76
SMARCA4P51532 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SMARCA4P51532 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMARCA4P51532 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SMARCA4P51532 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.08□□□□□ -1.76
SMARCA4P51532 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.08□□□□□ -1.76
SMARCA4P51532 GABPAP-201ENST00000419271 1356 ntBASIC4.07□□□□□ -1.76
SMARCA4P51532 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SMARCA4P51532 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SMARCA4P51532 NSRP1P1-201ENST00000444067 1693 ntBASIC4.07□□□□□ -1.76
SMARCA4P51532 AL445437.1-201ENST00000623157 3087 ntBASIC4.07□□□□□ -1.76
SMARCA4P51532 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.07□□□□□ -1.76
SMARCA4P51532 AL356292.1-201ENST00000283110 373 ntBASIC4.07□□□□□ -1.76
SMARCA4P51532 RNU6-984P-201ENST00000363236 109 ntBASIC4.07□□□□□ -1.76
SMARCA4P51532 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SMARCA4P51532 SNORA17.3-201ENST00000391159 129 ntBASIC4.07□□□□□ -1.76
SMARCA4P51532 AL121882.1-201ENST00000422893 417 ntBASIC4.07□□□□□ -1.76
SMARCA4P51532 CACYBPP1-201ENST00000438592 684 ntBASIC4.07□□□□□ -1.76
SMARCA4P51532 SCARNA17.1-201ENST00000516211 143 ntBASIC4.07□□□□□ -1.76
SMARCA4P51532 SCARNA17.2-201ENST00000516334 143 ntBASIC4.07□□□□□ -1.76
SMARCA4P51532 RNA5SP380-201ENST00000517190 98 ntBASIC4.07□□□□□ -1.76
SMARCA4P51532 AC103710.1-201ENST00000610003 901 ntBASIC4.07□□□□□ -1.76
SMARCA4P51532 SCARNA17.4-201ENST00000614296 143 ntBASIC4.07□□□□□ -1.76
SMARCA4P51532 AC022960.2-201ENST00000616300 666 ntBASIC4.07□□□□□ -1.76
SMARCA4P51532 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
SMARCA4P51532 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.07□□□□□ -1.76
SMARCA4P51532 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.07□□□□□ -1.76
SMARCA4P51532 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SMARCA4P51532 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SMARCA4P51532 Y_RNA.466-201ENST00000384294 113 ntBASIC4.06□□□□□ -1.76
SMARCA4P51532 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.06□□□□□ -1.76
SMARCA4P51532 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.06□□□□□ -1.76
SMARCA4P51532 XKRY-201ENST00000510392 1100 ntBASIC4.06□□□□□ -1.76
SMARCA4P51532 RNA5SP76-201ENST00000516277 87 ntBASIC4.06□□□□□ -1.76
SMARCA4P51532 AC021733.2-201ENST00000518830 497 ntBASIC4.06□□□□□ -1.76
SMARCA4P51532 BX664608.1-201ENST00000610519 487 ntBASIC4.06□□□□□ -1.76
SMARCA4P51532 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMARCA4P51532 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SMARCA4P51532 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.06□□□□□ -1.76
SMARCA4P51532 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.06□□□□□ -1.76
SMARCA4P51532 Y_RNA.140-201ENST00000363474 103 ntBASIC4.06□□□□□ -1.76
SMARCA4P51532 MIR137-201ENST00000385223 102 ntBASIC4.06□□□□□ -1.76
SMARCA4P51532 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.06□□□□□ -1.76
SMARCA4P51532 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.06□□□□□ -1.76
SMARCA4P51532 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.06□□□□□ -1.76
SMARCA4P51532 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.06□□□□□ -1.76
SMARCA4P51532 TP73-AS1.1-201ENST00000611447 161 ntBASIC4.06□□□□□ -1.76
SMARCA4P51532 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMARCA4P51532 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SMARCA4P51532 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SMARCA4P51532 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SMARCA4P51532 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SMARCA4P51532 RPS15AP28-201ENST00000435088 386 ntBASIC4.05□□□□□ -1.76
SMARCA4P51532 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.05□□□□□ -1.76
SMARCA4P51532 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.05□□□□□ -1.76
SMARCA4P51532 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMARCA4P51532 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SMARCA4P51532 AC093010.3-201ENST00000570269 15214 ntBASIC4.05□□□□□ -1.76
SMARCA4P51532 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMARCA4P51532 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SMARCA4P51532 AL139156.1-201ENST00000412785 841 ntBASIC4.04□□□□□ -1.76
SMARCA4P51532 HMGB1P11-201ENST00000413899 637 ntBASIC4.04□□□□□ -1.76
SMARCA4P51532 AL162388.1-201ENST00000450912 352 ntBASIC4.04□□□□□ -1.76
SMARCA4P51532 FAM92A1P2-202ENST00000504766 877 ntBASIC4.04□□□□□ -1.76
SMARCA4P51532 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.04□□□□□ -1.76
SMARCA4P51532 AK6P1-201ENST00000540219 478 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms