Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CASP4P49662 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CASP4P49662 RNA5SP374-201ENST00000362939 125 ntBASIC3.38□□□□□ -1.87
CASP4P49662 RNU6-374P-201ENST00000364146 108 ntBASIC3.38□□□□□ -1.87
CASP4P49662 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.38□□□□□ -1.87
CASP4P49662 RNU6-549P-201ENST00000384433 107 ntBASIC3.38□□□□□ -1.87
CASP4P49662 MTCO2P31-201ENST00000402702 684 ntBASIC3.38□□□□□ -1.87
CASP4P49662 RNU4-47P-201ENST00000410876 114 ntBASIC3.38□□□□□ -1.87
CASP4P49662 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.38□□□□□ -1.87
CASP4P49662 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.38□□□□□ -1.87
CASP4P49662 OFD1P18Y-201ENST00000420889 959 ntBASIC3.38□□□□□ -1.87
CASP4P49662 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.38□□□□□ -1.87
CASP4P49662 AL353678.1-201ENST00000422735 741 ntBASIC3.38□□□□□ -1.87
CASP4P49662 B3GNT2P1-201ENST00000434960 952 ntBASIC3.38□□□□□ -1.87
CASP4P49662 AC006028.1-201ENST00000438379 402 ntBASIC3.38□□□□□ -1.87
CASP4P49662 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.38□□□□□ -1.87
CASP4P49662 GXYLT1P1-201ENST00000446657 490 ntBASIC3.38□□□□□ -1.87
CASP4P49662 AL050341.1-201ENST00000447743 313 ntBASIC3.38□□□□□ -1.87
CASP4P49662 AC104978.1-201ENST00000449387 391 ntBASIC3.38□□□□□ -1.87
CASP4P49662 OR51B8P-201ENST00000449892 769 ntBASIC3.38□□□□□ -1.87
CASP4P49662 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.38□□□□□ -1.87
CASP4P49662 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.38□□□□□ -1.87
CASP4P49662 NAP1L1P3-201ENST00000462291 880 ntBASIC3.38□□□□□ -1.87
CASP4P49662 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.38□□□□□ -1.87
CASP4P49662 RPL32P34-201ENST00000486380 400 ntBASIC3.38□□□□□ -1.87
CASP4P49662 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.38□□□□□ -1.87
CASP4P49662 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.38□□□□□ -1.87
CASP4P49662 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.38□□□□□ -1.87
CASP4P49662 AC010265.1-201ENST00000513509 211 ntBASIC3.38□□□□□ -1.87
CASP4P49662 RPL12P22-201ENST00000519073 490 ntBASIC3.38□□□□□ -1.87
CASP4P49662 AC068657.1-201ENST00000520807 306 ntBASIC3.38□□□□□ -1.87
CASP4P49662 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.38□□□□□ -1.87
CASP4P49662 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.38□□□□□ -1.87
CASP4P49662 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CASP4P49662 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.38□□□□□ -1.87
CASP4P49662 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.38□□□□□ -1.87
CASP4P49662 NIFKP8-201ENST00000560500 874 ntBASIC3.38□□□□□ -1.87
CASP4P49662 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.38□□□□□ -1.87
CASP4P49662 AL845331.3-202ENST00000562856 261 ntBASIC3.38□□□□□ -1.87
CASP4P49662 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.38□□□□□ -1.87
CASP4P49662 AL513477.2-201ENST00000607858 568 ntBASIC3.38□□□□□ -1.87
CASP4P49662 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.38□□□□□ -1.87
CASP4P49662 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.38□□□□□ -1.87
CASP4P49662 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CASP4P49662 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CASP4P49662 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.38□□□□□ -1.87
CASP4P49662 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
CASP4P49662 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CASP4P49662 Y_RNA.110-201ENST00000363220 99 ntBASIC3.37□□□□□ -1.87
CASP4P49662 SNORA70.4-201ENST00000365509 134 ntBASIC3.37□□□□□ -1.87
CASP4P49662 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CASP4P49662 U3.19-201ENST00000390893 196 ntBASIC3.37□□□□□ -1.87
CASP4P49662 HMGB3P23-201ENST00000414981 585 ntBASIC3.37□□□□□ -1.87
CASP4P49662 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.37□□□□□ -1.87
CASP4P49662 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CASP4P49662 RPL23AP69-201ENST00000431134 458 ntBASIC3.37□□□□□ -1.87
CASP4P49662 ELOCP13-201ENST00000443934 329 ntBASIC3.37□□□□□ -1.87
CASP4P49662 AC016696.1-201ENST00000446949 318 ntBASIC3.37□□□□□ -1.87
CASP4P49662 AC017099.1-201ENST00000448261 1028 ntBASIC3.37□□□□□ -1.87
CASP4P49662 RN7SL807P-201ENST00000470923 297 ntBASIC3.37□□□□□ -1.87
CASP4P49662 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.37□□□□□ -1.87
CASP4P49662 RN7SL20P-201ENST00000488827 297 ntBASIC3.37□□□□□ -1.87
CASP4P49662 HMGB1P38-201ENST00000490557 577 ntBASIC3.37□□□□□ -1.87
CASP4P49662 AC006445.1-201ENST00000491925 405 ntBASIC3.37□□□□□ -1.87
CASP4P49662 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CASP4P49662 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.37□□□□□ -1.87
CASP4P49662 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.37□□□□□ -1.87
CASP4P49662 RNU6-334P-201ENST00000517072 102 ntBASIC3.37□□□□□ -1.87
CASP4P49662 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CASP4P49662 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.37□□□□□ -1.87
CASP4P49662 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.37□□□□□ -1.87
CASP4P49662 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.37□□□□□ -1.87
CASP4P49662 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.37□□□□□ -1.87
CASP4P49662 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.37□□□□□ -1.87
CASP4P49662 MIR4789-201ENST00000577469 82 ntBASIC3.37□□□□□ -1.87
CASP4P49662 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.37□□□□□ -1.87
CASP4P49662 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.37□□□□□ -1.87
CASP4P49662 BNIP3P33-201ENST00000598912 569 ntBASIC3.37□□□□□ -1.87
CASP4P49662 AL355812.1-201ENST00000603215 216 ntBASIC3.37□□□□□ -1.87
CASP4P49662 AC013468.1-201ENST00000608680 598 ntBASIC3.37□□□□□ -1.87
CASP4P49662 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.37□□□□□ -1.87
CASP4P49662 AP005229.2-201ENST00000609980 697 ntBASIC3.37□□□□□ -1.87
CASP4P49662 AC099778.2-201ENST00000610904 211 ntBASIC3.37□□□□□ -1.87
CASP4P49662 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.37□□□□□ -1.87
CASP4P49662 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.37□□□□□ -1.87
CASP4P49662 MIR3651-201ENST00000630427 90 ntBASIC3.37□□□□□ -1.87
CASP4P49662 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.37□□□□□ -1.87
CASP4P49662 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CASP4P49662 AL079305.1-201ENST00000623159 3008 ntBASIC3.37□□□□□ -1.87
CASP4P49662 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CASP4P49662 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CASP4P49662 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CASP4P49662 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CASP4P49662 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.36□□□□□ -1.87
CASP4P49662 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CASP4P49662 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CASP4P49662 AC073325.2-201ENST00000339545 159 ntBASIC3.36□□□□□ -1.87
CASP4P49662 RNA5SP387-201ENST00000364226 106 ntBASIC3.36□□□□□ -1.87
CASP4P49662 RNU6-354P-201ENST00000383862 107 ntBASIC3.36□□□□□ -1.87
CASP4P49662 RNU6-610P-201ENST00000384264 107 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms